Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PHRF1Q9P1Y6 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.17□□□□□ -1.74
PHRF1Q9P1Y6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.17□□□□□ -1.74
PHRF1Q9P1Y6 AC007619.2-201ENST00000605743 379 ntBASIC4.17□□□□□ -1.74
PHRF1Q9P1Y6 AC090971.4-201ENST00000560291 1800 ntBASIC4.17□□□□□ -1.74
PHRF1Q9P1Y6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 BX276092.4-201ENST00000452056 248 ntBASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 COX6B1P6-201ENST00000522347 255 ntBASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 AC141257.3-201ENST00000572906 215 ntBASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 AL359535.1-201ENST00000612100 1087 ntBASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PHRF1Q9P1Y6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 AC107027.3-201ENST00000565095 3473 ntBASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 AC108734.1-201ENST00000439549 399 ntBASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 RPL12P26-201ENST00000452430 487 ntBASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 HMGB1P3-201ENST00000502802 616 ntBASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 NRBF2P5-201ENST00000603087 788 ntBASIC4.15□□□□□ -1.74
PHRF1Q9P1Y6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PHRF1Q9P1Y6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PHRF1Q9P1Y6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PHRF1Q9P1Y6 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 RNU6-55P-201ENST00000411092 107 ntBASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 RNU6-954P-201ENST00000411355 107 ntBASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 AC108938.1-201ENST00000451204 136 ntBASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 SLC31A1P1-201ENST00000451221 567 ntBASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 MRPS31P2-201ENST00000451581 518 ntBASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 Y_RNA.638-201ENST00000459374 113 ntBASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 AP001636.2-201ENST00000525517 696 ntBASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 AC025946.2-201ENST00000603398 234 ntBASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 CYCSP41-201ENST00000616920 296 ntBASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 AL031985.3-201ENST00000565390 2449 ntBASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 ZNF826P-207ENST00000622273 1910 ntBASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PHRF1Q9P1Y6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 RPL7P25-201ENST00000404151 721 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AL139413.1-201ENST00000421309 217 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 EIF5A2P1-201ENST00000564027 460 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AL132656.3-201ENST00000606384 1595 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AL450472.3-201ENST00000615578 367 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AC073069.1-201ENST00000428657 441 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 CST9LP2-201ENST00000437612 320 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AC112653.1-201ENST00000443851 386 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AC034159.1-201ENST00000513885 583 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 RNU1-41P-201ENST00000516161 162 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 RNU1-48P-201ENST00000516400 162 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AL139174.1-201ENST00000531489 886 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AC067852.4-201ENST00000590314 478 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AL122125.1-201ENST00000616999 600 ntBASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PHRF1Q9P1Y6 AC000403.1-201ENST00000613696 3585 ntBASIC4.12□□□□□ -1.75
PHRF1Q9P1Y6 RPS4XP8-201ENST00000402039 771 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms