Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AL139811.1-201ENST00000424779 2299 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC129502.1-201ENST00000623261 1654 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AP003486.1-201ENST00000525716 3994 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC025031.4-201ENST00000621248 3271 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 Y_RNA.47-201ENST00000362697 108 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RNU6-1252P-201ENST00000363054 104 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RNA5SP483-201ENST00000363431 118 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RNA5SP472-201ENST00000363868 119 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AMELY-202ENST00000383036 621 ntTSL 5 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RNU6-890P-201ENST00000384121 107 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 Y_RNA.476-201ENST00000384347 108 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RNY1P14-201ENST00000384426 108 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RNU6-393P-201ENST00000384475 107 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 SNORA41-201ENST00000384675 132 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 Y_RNA.557-201ENST00000384680 107 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 Y_RNA.574-201ENST00000384766 95 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC013442.1-201ENST00000397347 228 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 SNRPEP6-201ENST00000407465 277 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 U3.34-201ENST00000408198 212 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RNA5SP56-201ENST00000410277 118 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RN7SKP254-201ENST00000410685 310 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC114491.1-201ENST00000416095 246 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AL663061.1-201ENST00000416625 580 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RPL30P3-201ENST00000424262 333 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC008267.5-201ENST00000424928 265 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 USMG5P1-201ENST00000425964 177 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RPS26P47-201ENST00000427219 348 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AL360081.1-201ENST00000428299 555 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC092162.1-201ENST00000432828 434 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AL645568.3-201ENST00000433683 316 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC073410.1-201ENST00000435125 589 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 OR51R1P-201ENST00000435309 952 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 NQO1-204ENST00000439109 924 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC099799.1-201ENST00000439809 192 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 LINC00545-201ENST00000440633 411 ntTSL 2 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 Z98949.2-201ENST00000440996 144 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AL359672.1-201ENST00000442302 409 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 GAPDHP33-201ENST00000443168 1013 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RPL4P2-201ENST00000447259 1282 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC097463.1-201ENST00000447288 481 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 GAPDHP27-201ENST00000447427 1020 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RPS18P1-201ENST00000447840 458 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 RPL7L1P1-201ENST00000448259 785 ntBASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC1.8□□□□□ -2.12
LCE3DQ9BYE3 GAPDHP28-201ENST00000455134 1003 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms