Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 FLJ42393-201ENST00000623801 2270 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 Y_RNA.20-201ENST00000362479 113 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 RNY4P16-201ENST00000364768 94 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 Y_RNA.404-201ENST00000383978 102 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 MIR454-201ENST00000390180 115 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 MRPL53P1-201ENST00000414323 319 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 RPS15AP12-201ENST00000419498 388 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 OR4K11P-201ENST00000431829 904 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 RPL23AP64-201ENST00000469465 435 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC092436.1-201ENST00000506450 503 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 RN7SKP99-201ENST00000517028 307 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 IGKV2D-23-201ENST00000518179 286 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AL137161.1-201ENST00000532231 390 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 OR4K8P-201ENST00000578842 1048 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC015818.6-201ENST00000584274 634 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 Z98751.3-201ENST00000604447 521 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC091193.1-201ENST00000604640 448 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 SDR42E1P2-201ENST00000614861 481 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 SDR42E1P4-201ENST00000620894 481 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 U6.104-201ENST00000637979 90 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC107980.1-201ENST00000558671 3355 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 SRRM1P3-201ENST00000426911 2678 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 OR56A5-201ENST00000340110 738 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 RNU6-280P-201ENST00000364145 104 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 RNU6-657P-201ENST00000383904 107 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 RNU6-398P-201ENST00000384143 109 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 RNU1-77P-201ENST00000390868 162 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 UBE2V1P2-201ENST00000397758 440 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AL391417.1-201ENST00000404100 426 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 RNU2-23P-201ENST00000410545 195 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 RNU2-14P-201ENST00000411053 191 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AL096829.1-201ENST00000413677 457 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 RPL36P18-201ENST00000419316 318 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AC006946.1-201ENST00000429106 328 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AL935212.3-201ENST00000450729 284 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 snoU13.22-201ENST00000459428 104 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AL049714.1-201ENST00000466686 347 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 AC114801.2-201ENST00000503825 781 ntBASIC6.16□□□□□ -1.42
COL25A1Q9BXS0 COX6CP8-201ENST00000522620 226 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms