Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 MIR4502-201ENST00000580432 81 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 MIR4293-201ENST00000584305 78 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC006272.2-201ENST00000594725 163 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC009233.1-201ENST00000616477 371 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC068769.1-201ENST00000474767 2426 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC109446.4-201ENST00000623235 2755 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC025809.2-201ENST00000625085 1802 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC093591.2-201ENST00000565254 3843 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AL121886.1-201ENST00000358609 435 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 RNU4-73P-201ENST00000363164 141 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 Y_RNA.535-201ENST00000384612 99 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 RNU6-332P-201ENST00000391193 108 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC005522.1-201ENST00000395416 346 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 AL023284.3-201ENST00000407767 334 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 RN7SKP281-201ENST00000410472 352 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 RN7SKP159-201ENST00000410657 292 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 EIF4A1P3-201ENST00000411521 244 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 EEF1A1P40-201ENST00000412883 573 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 CYCSP52-201ENST00000422857 310 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 RPL7P12-201ENST00000446719 750 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC021660.1-201ENST00000465006 554 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC022206.1-201ENST00000495947 347 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 H3F3AP3-201ENST00000497682 407 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC103843.2-201ENST00000530523 682 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 RPS3AP23-202ENST00000574601 686 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 OR1E3-201ENST00000575608 948 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 RN7SL208P-201ENST00000577964 296 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AL445647.2-201ENST00000615170 130 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC079684.1-201ENST00000621405 437 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC099654.10-201ENST00000640395 161 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 AC010624.4-201ENST00000597606 1351 ntBASIC6.41□□□□□ -1.38
CCDC97Q96F63 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC97Q96F63 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC97Q96F63 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC97Q96F63 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC97Q96F63 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCDC97Q96F63 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
CCDC97Q96F63 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC97Q96F63 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC97Q96F63 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC97Q96F63 DOCK11P1-201ENST00000553480 5932 ntBASIC6.4□□□□□ -1.38
CCDC97Q96F63 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
CCDC97Q96F63 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC97Q96F63 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC97Q96F63 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC97Q96F63 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC97Q96F63 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC97Q96F63 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC97Q96F63 Y_RNA.166-201ENST00000363730 102 ntBASIC6.4□□□□□ -1.38
CCDC97Q96F63 RN7SKP6-201ENST00000364795 319 ntBASIC6.4□□□□□ -1.38
CCDC97Q96F63 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CCDC97Q96F63 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms