Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
RSPO4Q2I0M5 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RSPO4Q2I0M5 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RSPO4Q2I0M5 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RSPO4Q2I0M5 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.77□□□□□ -1.49
RSPO4Q2I0M5 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RSPO4Q2I0M5 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RSPO4Q2I0M5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.77□□□□□ -1.49
RSPO4Q2I0M5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RSPO4Q2I0M5 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC024587.1-201ENST00000505925 2157 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 RNA5SP305-201ENST00000362665 119 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 Y_RNA.152-201ENST00000363578 100 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 RNU6-450P-201ENST00000364654 107 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 Y_RNA.477-201ENST00000384352 108 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 Y_RNA.496-201ENST00000384444 101 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC104837.2-201ENST00000427236 424 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 GMFBP1-201ENST00000467831 427 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC058823.1-201ENST00000485315 474 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC083982.1-201ENST00000485679 344 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC006499.2-201ENST00000513470 337 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 RNU6-1220P-201ENST00000517126 108 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC090572.1-201ENST00000519251 160 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 IGHV3-57-201ENST00000520143 280 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC008562.1-201ENST00000521763 330 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC093519.1-201ENST00000566109 298 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 SS18L2P2-201ENST00000583960 235 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 AC091953.3-201ENST00000623220 236 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 SRRM1P3-201ENST00000426911 2678 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RSPO4Q2I0M5 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 Y_RNA.46-201ENST00000362695 102 ntBASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 RNU4-66P-201ENST00000365199 138 ntBASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 RHOT1P2-201ENST00000366423 333 ntBASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 SNORA75B-201ENST00000384053 137 ntBASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 RNU6-38P-201ENST00000384085 107 ntBASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 RNU6-601P-201ENST00000384540 107 ntBASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 RNU6-606P-201ENST00000384721 111 ntBASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 AC013442.1-201ENST00000397347 228 ntBASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 RNU2-38P-201ENST00000410856 79 ntBASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 AL139396.1-201ENST00000421137 167 ntBASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 EIF4EP1-201ENST00000422311 642 ntBASIC5.75□□□□□ -1.49
RSPO4Q2I0M5 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms