Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 SNORD62.1-201ENST00000362541 86 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 RNU6-1290P-201ENST00000362957 109 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 RNA5SP132-201ENST00000364725 118 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 RPL9P21-201ENST00000392269 505 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 SDHDP6-201ENST00000414693 480 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 BX682237.1-201ENST00000415016 335 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 HMGN3P1-201ENST00000453847 193 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 LINC01399-202ENST00000458450 244 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 Y_RNA.644-201ENST00000459006 113 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 DYNLL1P5-201ENST00000467158 270 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 RN7SL809P-201ENST00000482040 297 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 AC027801.3-201ENST00000515049 698 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 Y_RNA.674-201ENST00000516362 113 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 AC120036.3-201ENST00000517826 292 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 Mico1.1-201ENST00000611698 204 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 AL138960.1-201ENST00000613838 513 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 AP001282.2-201ENST00000616149 309 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 AP000843.1-201ENST00000624880 701 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 AL589993.1-201ENST00000407450 2524 ntBASIC7.02□□□□□ -1.29
LRCH3Q96II8 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC097714.1-201ENST00000511272 1647 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC007993.1-201ENST00000621298 2430 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 MAPK10-323ENST00000641493 3207 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 TCP11X1-202ENST00000622971 1372 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 Y_RNA.122-201ENST00000363331 96 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 RNU6-511P-201ENST00000363496 107 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 RNU4-42P-201ENST00000364738 142 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 Y_RNA.576-201ENST00000384781 102 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 U3.20-201ENST00000390909 217 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC016769.3-201ENST00000396562 315 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC097374.1-203ENST00000400783 485 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 RPL7P49-201ENST00000471402 708 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 AP002812.1-201ENST00000495378 474 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 RNU6-488P-201ENST00000515918 99 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 SNORA25.14-201ENST00000516481 132 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC109329.1-201ENST00000518744 317 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AP003396.4-201ENST00000527574 265 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 RPA2P3-201ENST00000533268 770 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC092375.1-201ENST00000550410 637 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC024619.4-201ENST00000580924 316 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC010463.3-201ENST00000594077 500 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC068768.2-201ENST00000602352 343 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms