Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 7SK.7-201ENST00000603504 247 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AC087588.2-201ENST00000617667 426 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 AL161420.1-201ENST00000619393 264 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.15□□□□□ -1.42
DEPDC4Q8N2C3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
DEPDC4Q8N2C3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
DEPDC4Q8N2C3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.15□□□□□ -1.43
DEPDC4Q8N2C3 GABPAP-201ENST00000419271 1356 ntBASIC6.15□□□□□ -1.43
DEPDC4Q8N2C3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
DEPDC4Q8N2C3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.15□□□□□ -1.43
DEPDC4Q8N2C3 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
DEPDC4Q8N2C3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.15□□□□□ -1.43
DEPDC4Q8N2C3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
DEPDC4Q8N2C3 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-1252P-201ENST00000363054 104 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 SNORD116-11-201ENST00000383882 92 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-331P-201ENST00000384724 107 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 MIR551B-201ENST00000384984 96 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AL133260.1-201ENST00000405720 405 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-1304P-201ENST00000411374 106 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RPL31P12-201ENST00000422587 358 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RPS12P5-201ENST00000423449 371 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 SNAP23P1-201ENST00000433229 246 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AL356121.1-201ENST00000442911 156 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 MRPS31P2-201ENST00000451581 518 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC091685.2-201ENST00000454924 864 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RPL30P15-201ENST00000457129 321 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC092824.1-201ENST00000483524 576 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC004453.1-201ENST00000487895 408 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RN7SL649P-201ENST00000496974 275 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 HIGD1AP13-201ENST00000509878 289 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RN7SKP67-201ENST00000515905 235 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RNA5SP318-201ENST00000516352 92 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-685P-201ENST00000517088 95 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RN7SKP295-201ENST00000517264 153 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC091078.2-201ENST00000557145 559 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC010287.1-201ENST00000566916 357 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 RN7SL426P-201ENST00000579106 295 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC138761.3-201ENST00000579993 334 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC020914.7-201ENST00000594477 545 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC015982.1-201ENST00000608113 465 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AC004241.2-201ENST00000614562 444 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 AL445363.3-201ENST00000623080 671 ntBASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
DEPDC4Q8N2C3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC011504.1-201ENST00000623331 4103 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 SAGE2P-201ENST00000420011 2126 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AOX3P-204ENST00000491025 2107 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC027228.2-201ENST00000567141 2154 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-188P-201ENST00000364207 107 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-637P-201ENST00000384050 107 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 Y_RNA.452-201ENST00000384202 108 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 RNU1-46P-201ENST00000384425 164 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms