| FOXC1 | Q12948 | MIAT_exon5_1.1-201 | ENST00000618919 | 149 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | GOLT1B-210 | ENST00000631252 | 223 nt | TSL 3 BASIC | 6.27 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | U6.106-201 | ENST00000636360 | 105 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | WDR75-201 | ENST00000314761 | 2701 nt | APPRIS P1 TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | FAM13A-AS1-202 | ENST00000511543 | 2453 nt | TSL 2 BASIC | 6.27 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AL121950.1-201 | ENST00000624993 | 2077 nt | BASIC | 6.27 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC092828.1-201 | ENST00000501211 | 5391 nt | TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | LINC01224-203 | ENST00000596283 | 2766 nt | TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | SPATA17-201 | ENST00000366933 | 5818 nt | APPRIS P1 TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | CLDN12-201 | ENST00000287916 | 3565 nt | APPRIS P1 TSL 1 (best) BASIC | 6.27 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RALBP1-206 | ENST00000609094 | 3676 nt | TSL 2 BASIC | 6.27 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC093752.1-213 | ENST00000503038 | 2376 nt | TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC087501.5-201 | ENST00000607496 | 2374 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RIMKLB-207 | ENST00000538135 | 5392 nt | APPRIS P1 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC138627.1-203 | ENST00000641872 | 1680 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | CHRM5-201 | ENST00000383263 | 5410 nt | APPRIS P1 TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | PRUNE1-202 | ENST00000368934 | 2214 nt | TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | DNM1L-201 | ENST00000266481 | 3101 nt | APPRIS P1 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | ADAMTS3-204 | ENST00000622135 | 4479 nt | APPRIS P1 TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | LINC02197-201 | ENST00000502659 | 2767 nt | TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | MCM8-201 | ENST00000265187 | 3442 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | MAPK6-201 | ENST00000261845 | 5345 nt | APPRIS P1 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | TMEM108-201 | ENST00000321871 | 3744 nt | APPRIS P3 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC068860.1-201 | ENST00000623701 | 3736 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | OR52B3P-201 | ENST00000314715 | 928 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RNU5B-2P-201 | ENST00000363036 | 113 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RNU6-47P-201 | ENST00000383866 | 107 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RNU6-44P-201 | ENST00000384045 | 107 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | SNORD115-46-201 | ENST00000390982 | 71 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | U3.39-201 | ENST00000408569 | 239 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AL138733.1-201 | ENST00000415477 | 853 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC068286.1-201 | ENST00000416173 | 467 nt | TSL 4 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | SYF2P2-201 | ENST00000417620 | 583 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AP000235.1-201 | ENST00000424017 | 479 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | LINC01817-201 | ENST00000429317 | 564 nt | TSL 4 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC094019.1-201 | ENST00000434678 | 472 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RAC1P7-201 | ENST00000445367 | 377 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | PPIAP7-201 | ENST00000454070 | 489 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AL133351.3-201 | ENST00000454998 | 193 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | HMGB1P4-201 | ENST00000455362 | 567 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC005538.1-201 | ENST00000455991 | 594 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | SPAG11B-206 | ENST00000458665 | 444 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RNU7-187P-201 | ENST00000458985 | 68 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RNU7-169P-201 | ENST00000459456 | 61 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | OARD1-211 | ENST00000480585 | 829 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC024451.1-201 | ENST00000508013 | 779 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC108210.1-201 | ENST00000510772 | 825 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC092436.3-201 | ENST00000511788 | 257 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RNU2-69P-201 | ENST00000516061 | 100 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RNU6-911P-201 | ENST00000516523 | 104 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AF186190.1-201 | ENST00000517470 | 480 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AP000620.1-201 | ENST00000527147 | 504 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AL158058.1-201 | ENST00000549515 | 647 nt | TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC079610.3-201 | ENST00000606960 | 147 nt | TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AL352984.2-201 | ENST00000611153 | 546 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RN7SL787P-201 | ENST00000613000 | 284 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AL365222.1-201 | ENST00000614661 | 98 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | DLEU1_1.1-201 | ENST00000618107 | 190 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC073488.3-201 | ENST00000631611 | 778 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | ZNF345-216 | ENST00000640438 | 963 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | CD160-205 | ENST00000616463 | 3388 nt | APPRIS ALT2 TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | BMPR1B-201 | ENST00000264568 | 1807 nt | APPRIS P1 TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | DEUP1-202 | ENST00000525646 | 1920 nt | TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | MUM1L1-201 | ENST00000337685 | 4308 nt | APPRIS P1 TSL 3 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | ZNF33CP-201 | ENST00000432492 | 2030 nt | BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | EFCAB6-203 | ENST00000396231 | 4424 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | LRAT-206 | ENST00000507827 | 2654 nt | APPRIS P1 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | FAM71F1-207 | ENST00000485070 | 1574 nt | TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | HMBOX1-206 | ENST00000519047 | 1551 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | CHURC1-208 | ENST00000607599 | 3615 nt | TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RBPJ-202 | ENST00000342320 | 5761 nt | APPRIS P3 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | NCOA3-202 | ENST00000371998 | 4668 nt | APPRIS P4 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | PLEKHS1-203 | ENST00000369309 | 2534 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AMOT-203 | ENST00000371959 | 7319 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | NCOR1-205 | ENST00000395857 | 9501 nt | TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | TMEM99-201 | ENST00000301665 | 2058 nt | APPRIS P2 TSL 2 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | ZFHX4-204 | ENST00000518282 | 12175 nt | APPRIS ALT2 TSL 5 BASIC | 6.26 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | PLD1-202 | ENST00000351298 | 5604 nt | TSL 1 (best) BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | SMG1-202 | ENST00000446231 | 16115 nt | APPRIS P1 TSL 1 (best) BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | ZFAND6-212 | ENST00000559775 | 1602 nt | APPRIS P1 TSL 2 BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | MDM4-215 | ENST00000614459 | 9782 nt | TSL 5 BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | TRIM51HP-202 | ENST00000530412 | 1823 nt | BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | ZNF571-202 | ENST00000358744 | 2049 nt | APPRIS P1 TSL 2 BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | LINC00517-202 | ENST00000554257 | 3460 nt | TSL 2 BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | ZNF568-215 | ENST00000617745 | 2441 nt | TSL 5 BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | ASB8-201 | ENST00000317697 | 2615 nt | APPRIS P1 TSL 1 (best) BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AQP4-AS1-201 | ENST00000568797 | 3119 nt | TSL 2 BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RAI14-205 | ENST00000503673 | 3339 nt | APPRIS P1 TSL 2 BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | NEDD4L-207 | ENST00000435432 | 3417 nt | TSL 1 (best) BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | NAV2-202 | ENST00000360655 | 10667 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RNA5SP477-201 | ENST00000362639 | 119 nt | BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | Y_RNA.76-201 | ENST00000362931 | 109 nt | BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RNU6-960P-201 | ENST00000364056 | 120 nt | BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | S100A12-201 | ENST00000368737 | 518 nt | APPRIS P1 TSL 1 (best) BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | C1orf54-201 | ENST00000369098 | 418 nt | TSL 1 (best) BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | RNU6-417P-201 | ENST00000384712 | 107 nt | BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | MIR517A-201 | ENST00000385001 | 87 nt | BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AL160275.1-201 | ENST00000423632 | 476 nt | APPRIS P1 TSL 2 BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | CALM2P2-201 | ENST00000428512 | 440 nt | BASIC | 6.25 | □□□□□ -1.41 | | |
| FOXC1 | Q12948 | AC239367.3-201 | ENST00000428996 | 814 nt | BASIC | 6.25 | □□□□□ -1.41 | | |