Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
GTF2A1P52655 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GTF2A1P52655 RNU1-109P-201ENST00000383960 147 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 RAP1BP1-201ENST00000412709 553 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 TRGV6-201ENST00000417928 299 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.26□□□□□ -1.89
GTF2A1P52655 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.26□□□□□ -1.89
GTF2A1P52655 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.26□□□□□ -1.89
GTF2A1P52655 AC009480.2-201ENST00000422916 432 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.26□□□□□ -1.89
GTF2A1P52655 NPM1P24-201ENST00000428039 894 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 AC005189.1-201ENST00000431286 310 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 AL645931.1-201ENST00000439737 410 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 AL353898.1-201ENST00000444055 238 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GTF2A1P52655 AC069277.2-201ENST00000454211 432 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 AC007686.1-201ENST00000488511 463 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.26□□□□□ -1.89
GTF2A1P52655 AC023161.2-201ENST00000551218 780 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 BNIP3P5-201ENST00000562290 498 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 MIR5096-201ENST00000583713 70 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.26□□□□□ -1.89
GTF2A1P52655 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.26□□□□□ -1.89
GTF2A1P52655 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 RNU4-89P-201ENST00000607443 133 ntBASIC3.26□□□□□ -1.89
GTF2A1P52655 MTND5P24-201ENST00000438892 1767 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
GTF2A1P52655 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.25□□□□□ -1.89
GTF2A1P52655 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.25□□□□□ -1.89
GTF2A1P52655 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
GTF2A1P52655 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
GTF2A1P52655 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
GTF2A1P52655 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.25□□□□□ -1.89
GTF2A1P52655 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.25□□□□□ -1.89
GTF2A1P52655 OR6C69P-201ENST00000394268 893 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
GTF2A1P52655 AL139095.1-201ENST00000404326 391 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.25□□□□□ -1.89
GTF2A1P52655 TCEA1P4-201ENST00000415066 844 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 AL356095.1-201ENST00000417217 199 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.25□□□□□ -1.89
GTF2A1P52655 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.25□□□□□ -1.89
GTF2A1P52655 AC073143.1-201ENST00000436316 395 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 HMGB3P6-201ENST00000444896 598 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 AC115115.1-201ENST00000449927 248 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.25□□□□□ -1.89
GTF2A1P52655 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
GTF2A1P52655 MTND5P4-201ENST00000514978 288 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 MED28P5-201ENST00000528254 438 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.25□□□□□ -1.89
GTF2A1P52655 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.25□□□□□ -1.89
GTF2A1P52655 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.25□□□□□ -1.89
GTF2A1P52655 AC008745.1-201ENST00000604064 271 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 AC112503.1-201ENST00000608436 391 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 MIR6867-201ENST00000610636 67 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 AL732618.1-201ENST00000623251 301 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 AF001550.2-201ENST00000636643 217 ntBASIC3.25□□□□□ -1.89
GTF2A1P52655 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
GTF2A1P52655 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.24□□□□□ -1.89
GTF2A1P52655 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GTF2A1P52655 AC110792.3-201ENST00000595906 1614 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GTF2A1P52655 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.24□□□□□ -1.89
GTF2A1P52655 RPL21P65-201ENST00000406094 466 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.24□□□□□ -1.89
GTF2A1P52655 KCTD10P1-201ENST00000434203 625 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.24□□□□□ -1.89
GTF2A1P52655 HMGB1P45-201ENST00000435986 653 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 AC140076.1-201ENST00000449897 361 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
GTF2A1P52655 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.24□□□□□ -1.89
GTF2A1P52655 RN7SKP43-201ENST00000516173 320 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 RN7SKP82-201ENST00000516786 223 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 RNU6-579P-201ENST00000516879 102 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 RNU6-352P-201ENST00000516908 107 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.24□□□□□ -1.89
GTF2A1P52655 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.24□□□□□ -1.89
GTF2A1P52655 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
GTF2A1P52655 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.24□□□□□ -1.89
GTF2A1P52655 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.24□□□□□ -1.89
GTF2A1P52655 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.24□□□□□ -1.89
GTF2A1P52655 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.24□□□□□ -1.89
GTF2A1P52655 AADACP1-206ENST00000561502 1193 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 NF1P5-201ENST00000588287 448 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.24□□□□□ -1.89
GTF2A1P52655 AC015849.6-201ENST00000605454 474 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 AL591034.3-201ENST00000605511 685 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.24□□□□□ -1.89
GTF2A1P52655 AC006023.2-201ENST00000609916 167 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 AL591516.1-201ENST00000611326 274 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.24□□□□□ -1.89
GTF2A1P52655 AL356490.1-201ENST00000623079 479 ntBASIC3.24□□□□□ -1.89
GTF2A1P52655 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.24□□□□□ -1.89
GTF2A1P52655 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.24□□□□□ -1.89
GTF2A1P52655 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.24□□□□□ -1.89
GTF2A1P52655 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
GTF2A1P52655 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
GTF2A1P52655 CCNB2P1-201ENST00000399411 1150 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 AL034374.1-201ENST00000406329 351 ntBASIC3.23□□□□□ -1.89
GTF2A1P52655 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms