Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DYNLL1P7-201ENST00000429273 258 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.16□□□□□ -1.58
COL15A1P39059 AL358472.1-201ENST00000431295 329 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 AP000936.3-201ENST00000438127 255 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 AC009263.1-201ENST00000441193 1239 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.16□□□□□ -1.58
COL15A1P39059 EXTL2P1-201ENST00000446218 416 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 PTMAP3-201ENST00000447474 330 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.16□□□□□ -1.58
COL15A1P39059 AL591623.2-201ENST00000449978 222 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 AC233982.1-201ENST00000451247 436 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 MRPL35P4-201ENST00000453682 566 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 RPL29P14-201ENST00000495837 428 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 AC084024.2-201ENST00000503480 791 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.16□□□□□ -1.58
COL15A1P39059 DSTNP2-201ENST00000504533 515 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.16□□□□□ -1.58
COL15A1P39059 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.16□□□□□ -1.58
COL15A1P39059 AC108471.1-201ENST00000513977 287 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.16□□□□□ -1.58
COL15A1P39059 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.16□□□□□ -1.58
COL15A1P39059 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.16□□□□□ -1.58
COL15A1P39059 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.16□□□□□ -1.58
COL15A1P39059 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.16□□□□□ -1.58
COL15A1P39059 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.16□□□□□ -1.58
COL15A1P39059 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.16□□□□□ -1.58
COL15A1P39059 AC008088.1-201ENST00000580993 280 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.16□□□□□ -1.58
COL15A1P39059 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.16□□□□□ -1.58
COL15A1P39059 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL15A1P39059 AL161756.2-201ENST00000604597 246 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 AC012314.7-201ENST00000619693 93 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 AC026422.1-201ENST00000623961 452 ntBASIC5.16□□□□□ -1.58
COL15A1P39059 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL15A1P39059 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL15A1P39059 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
COL15A1P39059 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL15A1P39059 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.15□□□□□ -1.58
COL15A1P39059 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.15□□□□□ -1.58
COL15A1P39059 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL15A1P39059 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL15A1P39059 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.15□□□□□ -1.59
COL15A1P39059 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
COL15A1P39059 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL15A1P39059 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL15A1P39059 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL15A1P39059 SFR1P1-201ENST00000403720 688 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 HDGFP1-201ENST00000405943 252 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 SNORA57.3-201ENST00000411095 141 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.15□□□□□ -1.59
COL15A1P39059 MTND2P18-201ENST00000419962 1030 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.15□□□□□ -1.59
COL15A1P39059 AC091286.1-201ENST00000431233 461 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.15□□□□□ -1.59
COL15A1P39059 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.15□□□□□ -1.59
COL15A1P39059 NECAP1P2-201ENST00000455668 727 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AL122001.1-201ENST00000457027 370 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.15□□□□□ -1.59
COL15A1P39059 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
COL15A1P39059 AC073522.1-201ENST00000483312 377 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 RPL5P23-201ENST00000496040 868 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.15□□□□□ -1.59
COL15A1P39059 AC026726.1-201ENST00000512859 601 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 RNU5A-4P-201ENST00000516588 111 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AC023632.1-201ENST00000518463 375 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.15□□□□□ -1.59
COL15A1P39059 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL15A1P39059 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.15□□□□□ -1.59
COL15A1P39059 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.15□□□□□ -1.59
COL15A1P39059 GTF2IP22-201ENST00000554443 182 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AL390334.1-201ENST00000556395 450 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AL132657.2-201ENST00000564417 358 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AC007599.1-201ENST00000568688 1174 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.15□□□□□ -1.59
COL15A1P39059 AC022662.1-201ENST00000580252 331 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.15□□□□□ -1.59
COL15A1P39059 AL353778.1-201ENST00000603149 408 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AC096553.1-201ENST00000605169 829 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 MIR432-201ENST00000606207 94 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.15□□□□□ -1.59
COL15A1P39059 AL031666.3-201ENST00000609320 1006 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AC055764.2-201ENST00000610089 670 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.15□□□□□ -1.59
COL15A1P39059 AC087821.2-201ENST00000637086 450 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 AC009093.8-201ENST00000641769 292 ntBASIC5.15□□□□□ -1.59
COL15A1P39059 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
COL15A1P39059 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL15A1P39059 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.14□□□□□ -1.59
COL15A1P39059 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL15A1P39059 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL15A1P39059 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 Z95327.2-201ENST00000414579 1873 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
COL15A1P39059 Y_RNA.169-201ENST00000363745 96 ntBASIC5.14□□□□□ -1.59
COL15A1P39059 SNORD116.1-201ENST00000365628 92 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms