Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC3.14□□□□□ -1.91
VCANP13611 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
VCANP13611 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.14□□□□□ -1.91
VCANP13611 AL591623.2-201ENST00000449978 222 ntBASIC3.14□□□□□ -1.91
VCANP13611 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.14□□□□□ -1.91
VCANP13611 AC017037.1-201ENST00000508460 471 ntBASIC3.14□□□□□ -1.91
VCANP13611 AC005351.1-201ENST00000511152 786 ntBASIC3.14□□□□□ -1.91
VCANP13611 RN7SKP283-201ENST00000517197 270 ntBASIC3.14□□□□□ -1.91
VCANP13611 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.14□□□□□ -1.91
VCANP13611 YWHAZP1-201ENST00000556286 722 ntBASIC3.14□□□□□ -1.91
VCANP13611 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.14□□□□□ -1.91
VCANP13611 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VCANP13611 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.14□□□□□ -1.91
VCANP13611 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VCANP13611 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC3.14□□□□□ -1.91
VCANP13611 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
VCANP13611 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VCANP13611 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VCANP13611 SNORA71.1-201ENST00000364523 117 ntBASIC3.14□□□□□ -1.91
VCANP13611 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.14□□□□□ -1.91
VCANP13611 HMGB3P22-202ENST00000451823 572 ntBASIC3.14□□□□□ -1.91
VCANP13611 RPL23AP70-201ENST00000483361 460 ntBASIC3.14□□□□□ -1.91
VCANP13611 AP000926.3-201ENST00000497201 299 ntBASIC3.14□□□□□ -1.91
VCANP13611 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VCANP13611 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.14□□□□□ -1.91
VCANP13611 AC006518.1-201ENST00000541449 943 ntBASIC3.14□□□□□ -1.91
VCANP13611 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.14□□□□□ -1.91
VCANP13611 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VCANP13611 NF1P10-201ENST00000613227 742 ntBASIC3.14□□□□□ -1.91
VCANP13611 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.14□□□□□ -1.91
VCANP13611 AC005539.1-201ENST00000443768 1479 ntBASIC3.13□□□□□ -1.91
VCANP13611 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VCANP13611 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.13□□□□□ -1.91
VCANP13611 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VCANP13611 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VCANP13611 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VCANP13611 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.13□□□□□ -1.91
VCANP13611 RNA5SP213-201ENST00000391031 106 ntBASIC3.13□□□□□ -1.91
VCANP13611 AC092809.1-201ENST00000441469 474 ntBASIC3.13□□□□□ -1.91
VCANP13611 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.13□□□□□ -1.91
VCANP13611 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.13□□□□□ -1.91
VCANP13611 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VCANP13611 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.13□□□□□ -1.91
VCANP13611 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
VCANP13611 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VCANP13611 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.13□□□□□ -1.91
VCANP13611 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC3.13□□□□□ -1.91
VCANP13611 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
VCANP13611 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.13□□□□□ -1.91
VCANP13611 RNU2-52P-201ENST00000410680 190 ntBASIC3.13□□□□□ -1.91
VCANP13611 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.13□□□□□ -1.91
VCANP13611 AC008280.2-201ENST00000455473 307 ntBASIC3.13□□□□□ -1.91
VCANP13611 BTG4P1-201ENST00000510421 183 ntBASIC3.13□□□□□ -1.91
VCANP13611 AL157817.1-201ENST00000614264 790 ntBASIC3.13□□□□□ -1.91
VCANP13611 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
VCANP13611 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VCANP13611 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VCANP13611 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VCANP13611 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
VCANP13611 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
VCANP13611 IPO8P1-201ENST00000455509 3109 ntBASIC3.12□□□□□ -1.91
VCANP13611 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.12□□□□□ -1.91
VCANP13611 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
VCANP13611 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC3.12□□□□□ -1.91
VCANP13611 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.12□□□□□ -1.91
VCANP13611 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VCANP13611 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VCANP13611 FCF1P3-201ENST00000496394 590 ntBASIC3.12□□□□□ -1.91
VCANP13611 EIF1P6-201ENST00000600054 334 ntBASIC3.12□□□□□ -1.91
VCANP13611 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
VCANP13611 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.12□□□□□ -1.91
VCANP13611 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VCANP13611 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
VCANP13611 RPL7P26-201ENST00000333817 754 ntBASIC3.12□□□□□ -1.91
VCANP13611 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.12□□□□□ -1.91
VCANP13611 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
VCANP13611 RFPL4AP3-201ENST00000515267 345 ntBASIC3.12□□□□□ -1.91
VCANP13611 DNAJC19P3-201ENST00000594491 331 ntBASIC3.12□□□□□ -1.91
VCANP13611 NTAN1P1-201ENST00000603150 646 ntBASIC3.12□□□□□ -1.91
VCANP13611 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.12□□□□□ -1.91
VCANP13611 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.12□□□□□ -1.91
VCANP13611 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VCANP13611 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
VCANP13611 ZNF72P-201ENST00000425869 1908 ntBASIC3.12□□□□□ -1.91
VCANP13611 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VCANP13611 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
VCANP13611 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.11□□□□□ -1.91
VCANP13611 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.11□□□□□ -1.91
VCANP13611 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VCANP13611 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VCANP13611 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.11□□□□□ -1.91
VCANP13611 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.11□□□□□ -1.91
VCANP13611 YWHAQP9-201ENST00000445891 512 ntBASIC3.11□□□□□ -1.91
VCANP13611 AC112492.1-201ENST00000449607 712 ntBASIC3.11□□□□□ -1.91
VCANP13611 RPL21P99-201ENST00000480369 423 ntBASIC3.11□□□□□ -1.91
VCANP13611 AC005798.1-201ENST00000513715 387 ntBASIC3.11□□□□□ -1.91
VCANP13611 SCARNA17.1-201ENST00000516211 143 ntBASIC3.11□□□□□ -1.91
VCANP13611 SCARNA17.2-201ENST00000516334 143 ntBASIC3.11□□□□□ -1.91
VCANP13611 RN7SKP116-201ENST00000516902 319 ntBASIC3.11□□□□□ -1.91
VCANP13611 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms