Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC013412.1-201ENST00000610687 192 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 PLCE1P1-201ENST00000622094 305 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.68□□□□□ -1.82
COL4A1P02462 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
COL4A1P02462 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
COL4A1P02462 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL4A1P02462 SCN1A-220ENST00000641603 12506 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 MTND5P24-201ENST00000438892 1767 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
COL4A1P02462 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
COL4A1P02462 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.68□□□□□ -1.82
COL4A1P02462 SNORD15B-201ENST00000384714 146 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 NPM1P24-201ENST00000428039 894 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 RPS26P40-201ENST00000435209 294 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.68□□□□□ -1.82
COL4A1P02462 AC034159.1-201ENST00000513885 583 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL4A1P02462 AL512310.1-201ENST00000548639 172 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 RPL12P50-201ENST00000603116 116 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
COL4A1P02462 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.67□□□□□ -1.82
COL4A1P02462 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL4A1P02462 AC011503.2-201ENST00000594230 1500 ntBASIC3.67□□□□□ -1.82
COL4A1P02462 AC004944.1-201ENST00000517807 3059 ntBASIC3.67□□□□□ -1.82
COL4A1P02462 GABRG2-229ENST00000641017 3628 ntBASIC3.67□□□□□ -1.82
COL4A1P02462 RPS24P13-201ENST00000442520 397 ntBASIC3.67□□□□□ -1.82
COL4A1P02462 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.67□□□□□ -1.82
COL4A1P02462 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.67□□□□□ -1.82
COL4A1P02462 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.67□□□□□ -1.82
COL4A1P02462 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.67□□□□□ -1.82
COL4A1P02462 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.67□□□□□ -1.82
COL4A1P02462 AC022509.4-201ENST00000621404 572 ntBASIC3.67□□□□□ -1.82
COL4A1P02462 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.67□□□□□ -1.82
COL4A1P02462 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL4A1P02462 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.66□□□□□ -1.82
COL4A1P02462 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.66□□□□□ -1.82
COL4A1P02462 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL4A1P02462 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COL4A1P02462 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL4A1P02462 AL022322.2-201ENST00000624072 20397 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 RPL7P26-201ENST00000333817 754 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 RNA5SP126-201ENST00000365092 109 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 AC110754.1-201ENST00000399740 601 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 RPL7P25-201ENST00000404151 721 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 AL445528.1-201ENST00000426330 420 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 HMGN2P7-201ENST00000456186 273 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 AP000942.1-201ENST00000463969 747 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.66□□□□□ -1.82
COL4A1P02462 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL4A1P02462 H3F3AP1-201ENST00000559984 334 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 MIR5047-201ENST00000579212 100 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 AC006272.2-201ENST00000594725 163 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL4A1P02462 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
COL4A1P02462 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL4A1P02462 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL4A1P02462 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL4A1P02462 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.66□□□□□ -1.82
COL4A1P02462 AL049555.1-201ENST00000562834 1933 ntBASIC3.66□□□□□ -1.82
COL4A1P02462 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL4A1P02462 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.65□□□□□ -1.82
COL4A1P02462 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL4A1P02462 RNU6-301P-201ENST00000384277 107 ntBASIC3.65□□□□□ -1.82
COL4A1P02462 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.65□□□□□ -1.82
COL4A1P02462 Z98941.1-201ENST00000407764 100 ntBASIC3.65□□□□□ -1.82
COL4A1P02462 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.65□□□□□ -1.82
COL4A1P02462 RFPL4AP3-201ENST00000515267 345 ntBASIC3.65□□□□□ -1.82
COL4A1P02462 AC027309.2-201ENST00000520566 192 ntBASIC3.65□□□□□ -1.82
COL4A1P02462 MIR4425-201ENST00000580572 84 ntBASIC3.65□□□□□ -1.82
COL4A1P02462 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.65□□□□□ -1.82
COL4A1P02462 AC024153.1-201ENST00000603103 365 ntBASIC3.65□□□□□ -1.82
COL4A1P02462 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
COL4A1P02462 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL4A1P02462 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL4A1P02462 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.65□□□□□ -1.83
COL4A1P02462 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL4A1P02462 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.65□□□□□ -1.83
COL4A1P02462 AC112492.1-201ENST00000449607 712 ntBASIC3.65□□□□□ -1.83
COL4A1P02462 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.65□□□□□ -1.83
COL4A1P02462 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.65□□□□□ -1.83
COL4A1P02462 AC118465.1-201ENST00000513820 1271 ntBASIC3.65□□□□□ -1.83
COL4A1P02462 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.65□□□□□ -1.83
COL4A1P02462 AC104027.1-201ENST00000521887 300 ntBASIC3.65□□□□□ -1.83
COL4A1P02462 AP001636.2-201ENST00000525517 696 ntBASIC3.65□□□□□ -1.83
COL4A1P02462 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL4A1P02462 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL4A1P02462 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.65□□□□□ -1.83
COL4A1P02462 AC004832.5-201ENST00000608677 401 ntBASIC3.65□□□□□ -1.83
COL4A1P02462 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.65□□□□□ -1.83
COL4A1P02462 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
COL4A1P02462 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL4A1P02462 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.64□□□□□ -1.83
COL4A1P02462 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL4A1P02462 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.64□□□□□ -1.83
COL4A1P02462 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL4A1P02462 MTCO1P8-201ENST00000416914 1523 ntBASIC3.64□□□□□ -1.83
COL4A1P02462 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL4A1P02462 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
COL4A1P02462 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
COL4A1P02462 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms