Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.54□□□□□ -1.52
CTDP1Q9Y5B0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.54□□□□□ -1.52
CTDP1Q9Y5B0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.54□□□□□ -1.52
CTDP1Q9Y5B0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CTDP1Q9Y5B0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTDP1Q9Y5B0 AC012020.1-201ENST00000624541 1728 ntBASIC5.54□□□□□ -1.52
CTDP1Q9Y5B0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTDP1Q9Y5B0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTDP1Q9Y5B0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 MIR92A2-201ENST00000385299 75 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 SNORD65.1-201ENST00000390889 71 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 LINC00993-201ENST00000420453 540 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC012512.1-201ENST00000446594 718 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 RPL36AP33-201ENST00000450395 310 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 DDX39BP2-208ENST00000453923 258 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 RFC5P1-201ENST00000454419 874 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC116337.2-201ENST00000477662 156 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC093267.1-201ENST00000489176 961 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC104685.1-201ENST00000502445 371 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 DYNLL1P6-201ENST00000503440 264 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 SCARNA22-201ENST00000503991 125 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 DUXAP2-201ENST00000519198 589 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC087808.1-201ENST00000520501 361 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 RN7SL802P-201ENST00000577858 299 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC022884.3-201ENST00000579571 248 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 MIR4472-2-201ENST00000582069 67 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 RPL26P30-202ENST00000602923 645 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC092354.1-201ENST00000606057 376 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 MIR6810-201ENST00000622701 70 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC124312.6-202ENST00000623624 418 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 DDX18P4-201ENST00000511690 1966 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 TLK1P1-201ENST00000456760 2440 ntBASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTDP1Q9Y5B0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 HMGB1P5-201ENST00000255320 642 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 Y_RNA.18-201ENST00000362461 102 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 SNORA71.2-201ENST00000364941 134 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 SNORA62-201ENST00000365493 153 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 RN7SKP267-201ENST00000410381 285 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 RNU6-77P-201ENST00000410554 91 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AL591848.1-201ENST00000413092 322 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 COX5BP7-201ENST00000414780 274 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 RPL30P16-201ENST00000419341 429 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 RPL7P44-201ENST00000424827 742 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC009965.2-201ENST00000425328 970 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC016712.1-201ENST00000431088 378 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 MRPS10P2-201ENST00000431226 381 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 SEPT7P5-201ENST00000434048 306 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC009263.1-201ENST00000441193 1239 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 TPT1P12-201ENST00000448968 492 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC239809.1-201ENST00000450470 217 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms