Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CBFA2T2-210ENST00000543126 3502 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 TACC2-203ENST00000358010 3815 ntTSL 5 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 RNU4-16P-201ENST00000364737 141 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 U3.52-201ENST00000384034 216 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AC005005.1-201ENST00000397595 682 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 RNA5SP144-201ENST00000410846 116 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AC099066.3-201ENST00000434499 301 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AL590396.1-201ENST00000450208 775 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AC009244.1-201ENST00000450566 258 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 RNU7-57P-201ENST00000459540 60 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AC010401.1-201ENST00000463867 348 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AC008155.2-201ENST00000464337 397 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 RN7SL234P-201ENST00000485574 295 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 RPL13P6-201ENST00000488133 626 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 RPL10P7-201ENST00000495649 625 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AC145146.1-201ENST00000496370 254 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 RN7SKP66-201ENST00000516681 231 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 IGKV2D-14-201ENST00000522473 355 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 RN7SKP4-201ENST00000606815 322 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AP003119.3-201ENST00000566747 4192 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 ACTN4P2-201ENST00000473049 1892 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AC120036.5-201ENST00000528139 2491 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AC011330.1-201ENST00000510070 3235 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 AC078846.1-201ENST00000608694 7083 ntBASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 ZNF709-201ENST00000397732 4910 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP3-3Q9BYR6 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 CAPN3-201ENST00000318023 3172 ntTSL 5 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 LRTOMT-203ENST00000324866 2402 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 SACS-202ENST00000402364 15134 ntTSL 2 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 MYRIP-210ENST00000539167 4635 ntTSL 2 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 CELF2-215ENST00000636488 3908 ntTSL 5 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 RNF185-202ENST00000326132 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 AL445933.1-201ENST00000434240 2242 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 PPY-201ENST00000225992 460 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 RPS13-201ENST00000228140 491 ntTSL 2 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 RNU6-1163P-201ENST00000364516 107 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 IGHV1-2-201ENST00000390594 417 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 KRTAP12-3-201ENST00000397907 410 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 REG3A-203ENST00000409839 788 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 AC244636.1-201ENST00000421152 228 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 ELOBP4-201ENST00000423418 296 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 AL512326.2-201ENST00000426359 151 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 AC079150.2-201ENST00000443733 78 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 RNU6-221P-201ENST00000459541 99 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 RN7SL359P-201ENST00000473502 288 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 BIN3-207ENST00000520292 775 ntTSL 5 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 DPPA5P2-201ENST00000561451 299 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 RN7SL381P-201ENST00000577658 298 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 RN7SL73P-201ENST00000585239 252 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 AP001017.1-201ENST00000591378 482 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 FTX_3.1-201ENST00000610451 147 ntBASIC4.67□□□□□ -1.66
KRTAP3-3Q9BYR6 GDNF-AS1-205ENST00000637926 3819 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms