Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AC004987.3-201ENST00000413879 771 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 RPL30P2-201ENST00000414021 291 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AL031736.2-201ENST00000426573 787 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 MTCO1P52-201ENST00000433928 531 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 GOT2P5-201ENST00000433995 546 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AC009263.1-201ENST00000441193 1239 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AL357552.1-201ENST00000445254 415 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AP000563.1-201ENST00000490865 758 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AC026784.1-201ENST00000507986 352 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 RNU6-760P-201ENST00000516078 97 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AC012414.2-201ENST00000559474 187 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 MIR3922-201ENST00000585192 84 ntBASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN20Q4JDL3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 MFSD8-233ENST00000641482 4860 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 RNU6-185P-201ENST00000384421 107 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 HMGB3P18-201ENST00000406327 590 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 ELOCP6-201ENST00000429066 328 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 AC091286.1-201ENST00000431233 461 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 RPS24P8-201ENST00000431490 402 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 BMS1P19-201ENST00000433925 393 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 HSPD1P21-201ENST00000436541 245 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 AC023512.1-201ENST00000444513 499 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 RPL21P23-201ENST00000446654 460 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 RBMY2UP-201ENST00000453474 324 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 ELOCP12-201ENST00000458706 328 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 RPL7P15-201ENST00000461190 712 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 RPL37P6-202ENST00000464216 403 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 AC108157.1-201ENST00000510511 539 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 AC021146.1-201ENST00000511202 716 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 SNORA48.9-201ENST00000516419 162 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 AL034351.1-201ENST00000605288 668 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 AC243312.2-201ENST00000623340 601 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 AC104820.1-201ENST00000624183 307 ntBASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.66□□□□□ -1.82
PTPN20Q4JDL3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PTPN20Q4JDL3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
PTPN20Q4JDL3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PTPN20Q4JDL3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
PTPN20Q4JDL3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 SNORD17-201ENST00000390930 237 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 Z98941.1-201ENST00000407764 100 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AL158071.1-201ENST00000430315 461 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 MED6P1-201ENST00000439659 713 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 RPS4XP2-201ENST00000458402 793 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AC025518.1-201ENST00000479856 347 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 HMGB1P3-201ENST00000502802 616 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 RN7SKP82-201ENST00000516786 223 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 PTP4A1P6-201ENST00000531034 478 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 MTND4LP24-201ENST00000572277 291 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 BX322635.1-201ENST00000605804 496 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms