Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 VN1R104P-201ENST00000505115 1009 ntBASIC3.98□□□□□ -1.77
CACNA1SQ13698 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 HMGB1P6-201ENST00000569046 646 ntBASIC3.98□□□□□ -1.77
CACNA1SQ13698 AL162574.2-201ENST00000614618 657 ntBASIC3.98□□□□□ -1.77
CACNA1SQ13698 ZNF90P1-201ENST00000480493 1951 ntBASIC3.98□□□□□ -1.77
CACNA1SQ13698 CR383658.2-201ENST00000547576 1525 ntBASIC3.97□□□□□ -1.77
CACNA1SQ13698 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.97□□□□□ -1.77
CACNA1SQ13698 AC107021.2-201ENST00000567714 2095 ntBASIC3.97□□□□□ -1.77
CACNA1SQ13698 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CACNA1SQ13698 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CACNA1SQ13698 SNORA71.1-201ENST00000364523 117 ntBASIC3.97□□□□□ -1.77
CACNA1SQ13698 SNORA18.3-201ENST00000384122 132 ntBASIC3.97□□□□□ -1.77
CACNA1SQ13698 AC013470.3-201ENST00000420252 1194 ntBASIC3.97□□□□□ -1.77
CACNA1SQ13698 AC108734.1-201ENST00000439549 399 ntBASIC3.97□□□□□ -1.77
CACNA1SQ13698 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.97□□□□□ -1.77
CACNA1SQ13698 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.97□□□□□ -1.77
CACNA1SQ13698 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CACNA1SQ13698 FAM35BP-202ENST00000497389 3337 ntBASIC3.97□□□□□ -1.77
CACNA1SQ13698 AC007390.2-201ENST00000606229 3803 ntBASIC3.97□□□□□ -1.77
CACNA1SQ13698 CEP170P1-201ENST00000502249 4587 ntBASIC3.97□□□□□ -1.77
CACNA1SQ13698 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CACNA1SQ13698 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CACNA1SQ13698 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.96□□□□□ -1.77
CACNA1SQ13698 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.96□□□□□ -1.77
CACNA1SQ13698 AC005002.1-201ENST00000447458 540 ntBASIC3.96□□□□□ -1.77
CACNA1SQ13698 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CACNA1SQ13698 RNA5SP356-201ENST00000515972 94 ntBASIC3.96□□□□□ -1.77
CACNA1SQ13698 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.96□□□□□ -1.77
CACNA1SQ13698 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.96□□□□□ -1.77
CACNA1SQ13698 MIR6715A-201ENST00000615929 79 ntBASIC3.96□□□□□ -1.77
CACNA1SQ13698 RLIMP2-201ENST00000427891 1563 ntBASIC3.96□□□□□ -1.77
CACNA1SQ13698 AC092435.3-201ENST00000565538 3654 ntBASIC3.96□□□□□ -1.78
CACNA1SQ13698 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CACNA1SQ13698 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CACNA1SQ13698 AC106901.1-201ENST00000425086 698 ntBASIC3.96□□□□□ -1.78
CACNA1SQ13698 PTP4A1P3-201ENST00000433661 420 ntBASIC3.96□□□□□ -1.78
CACNA1SQ13698 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 AC112492.1-201ENST00000449607 712 ntBASIC3.96□□□□□ -1.78
CACNA1SQ13698 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 RPS4XP13-201ENST00000483219 789 ntBASIC3.96□□□□□ -1.78
CACNA1SQ13698 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 AL008729.2-201ENST00000606393 473 ntBASIC3.96□□□□□ -1.78
CACNA1SQ13698 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CACNA1SQ13698 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CACNA1SQ13698 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CACNA1SQ13698 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CACNA1SQ13698 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.95□□□□□ -1.78
CACNA1SQ13698 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CACNA1SQ13698 AL450326.2-201ENST00000421913 1962 ntBASIC3.95□□□□□ -1.78
CACNA1SQ13698 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CACNA1SQ13698 RNA5SP184-201ENST00000411071 108 ntBASIC3.95□□□□□ -1.78
CACNA1SQ13698 AL592148.1-201ENST00000413568 445 ntBASIC3.95□□□□□ -1.78
CACNA1SQ13698 NUP35P1-201ENST00000422734 947 ntBASIC3.95□□□□□ -1.78
CACNA1SQ13698 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CACNA1SQ13698 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.95□□□□□ -1.78
CACNA1SQ13698 MRPS31P2-201ENST00000451581 518 ntBASIC3.95□□□□□ -1.78
CACNA1SQ13698 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CACNA1SQ13698 RPS3AP43-201ENST00000479743 781 ntBASIC3.95□□□□□ -1.78
CACNA1SQ13698 AC021205.2-201ENST00000480069 347 ntBASIC3.95□□□□□ -1.78
CACNA1SQ13698 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.95□□□□□ -1.78
CACNA1SQ13698 AC010486.1-201ENST00000511793 424 ntBASIC3.95□□□□□ -1.78
CACNA1SQ13698 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CACNA1SQ13698 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.95□□□□□ -1.78
CACNA1SQ13698 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.95□□□□□ -1.78
CACNA1SQ13698 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CACNA1SQ13698 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CACNA1SQ13698 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CACNA1SQ13698 AC017071.1-201ENST00000564407 2204 ntBASIC3.95□□□□□ -1.78
CACNA1SQ13698 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CACNA1SQ13698 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CACNA1SQ13698 OR52B1P-201ENST00000316506 909 ntBASIC3.94□□□□□ -1.78
CACNA1SQ13698 AP002088.1-201ENST00000382740 395 ntBASIC3.94□□□□□ -1.78
CACNA1SQ13698 ARF4P3-201ENST00000397387 509 ntBASIC3.94□□□□□ -1.78
CACNA1SQ13698 RN7SKP56-201ENST00000410513 331 ntBASIC3.94□□□□□ -1.78
CACNA1SQ13698 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.94□□□□□ -1.78
CACNA1SQ13698 AC233982.1-201ENST00000451247 436 ntBASIC3.94□□□□□ -1.78
CACNA1SQ13698 RPS4XP22-201ENST00000480755 780 ntBASIC3.94□□□□□ -1.78
CACNA1SQ13698 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.94□□□□□ -1.78
CACNA1SQ13698 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms