Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.57□□□□□ -1.68
HDAC4P56524 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.57□□□□□ -1.68
HDAC4P56524 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HDAC4P56524 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.57□□□□□ -1.68
HDAC4P56524 MIR7154-201ENST00000620673 73 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 AP000843.1-201ENST00000624880 701 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.57□□□□□ -1.68
HDAC4P56524 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.57□□□□□ -1.68
HDAC4P56524 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HDAC4P56524 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HDAC4P56524 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HDAC4P56524 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HDAC4P56524 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 HMGB1P5-201ENST00000255320 642 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 OR5P1P-201ENST00000299512 925 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HDAC4P56524 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HDAC4P56524 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 RNU6-413P-201ENST00000384115 107 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AC097374.1-203ENST00000400783 485 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 RNU6-272P-201ENST00000411028 104 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 HMGB1P49-201ENST00000418882 569 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AC010099.3-201ENST00000423896 409 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 CNOT7P1-201ENST00000429006 852 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 AL645939.1-201ENST00000453429 797 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 MTND2P28-201ENST00000457540 1044 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AC104689.1-201ENST00000473356 768 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HDAC4P56524 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.56□□□□□ -1.68
HDAC4P56524 IGLVIV-65-201ENST00000517313 360 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 OR5BC1P-201ENST00000529327 739 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AC100770.1-201ENST00000532310 322 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 RFPL1S-203ENST00000539579 330 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AC135001.1-201ENST00000544546 283 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 AL161713.1-201ENST00000555538 145 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 AC009094.1-201ENST00000564443 426 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.56□□□□□ -1.68
HDAC4P56524 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 AL121834.1-201ENST00000572284 509 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 NIFKP6-201ENST00000598115 845 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HDAC4P56524 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HDAC4P56524 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.56□□□□□ -1.68
HDAC4P56524 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.56□□□□□ -1.68
HDAC4P56524 AC009951.1-201ENST00000623674 2614 ntBASIC4.56□□□□□ -1.68
HDAC4P56524 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.56□□□□□ -1.68
HDAC4P56524 AC025031.4-201ENST00000621248 3271 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC4P56524 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HDAC4P56524 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC4P56524 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC4P56524 AC105074.1-201ENST00000623380 3095 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
HDAC4P56524 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.55□□□□□ -1.68
HDAC4P56524 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HDAC4P56524 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HDAC4P56524 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.55□□□□□ -1.68
HDAC4P56524 NACA3P-201ENST00000359690 648 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 MIR331-201ENST00000362302 94 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HDAC4P56524 AC068538.1-201ENST00000376856 336 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 RNU6-83P-201ENST00000384568 112 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.55□□□□□ -1.68
HDAC4P56524 GSTA8P-201ENST00000404253 637 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 MIR1911-201ENST00000410783 80 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 ELOCP19-201ENST00000411919 318 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AL008987.1-201ENST00000415528 237 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 UBTFL3-201ENST00000418934 1024 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 PAICSP7-201ENST00000419829 962 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 RPL18P10-201ENST00000425606 538 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms