Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RN7SL52P-201ENST00000584271 284 ntBASIC4.91□□□□□ -1.62
NEK3P51956 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.91□□□□□ -1.62
NEK3P51956 AC008751.2-201ENST00000597885 980 ntBASIC4.91□□□□□ -1.62
NEK3P51956 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.91□□□□□ -1.62
NEK3P51956 uc_338.18-201ENST00000615451 175 ntBASIC4.91□□□□□ -1.62
NEK3P51956 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.91□□□□□ -1.62
NEK3P51956 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 AC067852.7-201ENST00000623270 535 ntBASIC4.91□□□□□ -1.62
NEK3P51956 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
NEK3P51956 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
NEK3P51956 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 ZNF542P-204ENST00000482727 1305 ntBASIC4.91□□□□□ -1.62
NEK3P51956 DCAF13P1-201ENST00000495256 1330 ntBASIC4.91□□□□□ -1.62
NEK3P51956 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 MTCO1P14-201ENST00000441695 1559 ntBASIC4.91□□□□□ -1.62
NEK3P51956 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
NEK3P51956 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.9□□□□□ -1.62
NEK3P51956 AL356473.1-201ENST00000406203 1408 ntBASIC4.9□□□□□ -1.62
NEK3P51956 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NEK3P51956 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NEK3P51956 AL359922.3-201ENST00000624779 1670 ntBASIC4.9□□□□□ -1.62
NEK3P51956 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NEK3P51956 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
NEK3P51956 AC012618.3-205ENST00000637896 1496 ntBASIC4.9□□□□□ -1.62
NEK3P51956 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
NEK3P51956 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NEK3P51956 RNVU1-6-201ENST00000364688 164 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AL357515.1-201ENST00000402967 542 ntBASIC4.9□□□□□ -1.63
NEK3P51956 MFSD13B-201ENST00000420133 1290 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AC004074.1-201ENST00000421810 1063 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AL022400.1-201ENST00000423946 935 ntBASIC4.9□□□□□ -1.63
NEK3P51956 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.9□□□□□ -1.63
NEK3P51956 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.9□□□□□ -1.63
NEK3P51956 RPS26P2-201ENST00000440331 348 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.9□□□□□ -1.63
NEK3P51956 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.9□□□□□ -1.63
NEK3P51956 AC000111.2-201ENST00000448200 210 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AC010733.1-201ENST00000451515 401 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AC006967.1-201ENST00000467608 589 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AC022795.1-201ENST00000473808 480 ntBASIC4.9□□□□□ -1.63
NEK3P51956 DEFB109F-201ENST00000491870 277 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AC108145.1-201ENST00000503770 153 ntBASIC4.9□□□□□ -1.63
NEK3P51956 MTCO3P44-201ENST00000510977 541 ntBASIC4.9□□□□□ -1.63
NEK3P51956 HMGB1P19-201ENST00000517578 577 ntBASIC4.9□□□□□ -1.63
NEK3P51956 IGKV2D-36-201ENST00000518643 226 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.9□□□□□ -1.63
NEK3P51956 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.9□□□□□ -1.63
NEK3P51956 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.9□□□□□ -1.63
NEK3P51956 AP001880.2-201ENST00000538233 448 ntBASIC4.9□□□□□ -1.63
NEK3P51956 CR383656.6-201ENST00000550518 394 ntBASIC4.9□□□□□ -1.63
NEK3P51956 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.63
NEK3P51956 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.9□□□□□ -1.63
NEK3P51956 AC087477.6-201ENST00000559595 843 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.9□□□□□ -1.63
NEK3P51956 LARP7P2-201ENST00000575306 125 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.9□□□□□ -1.63
NEK3P51956 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.9□□□□□ -1.63
NEK3P51956 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.9□□□□□ -1.63
NEK3P51956 AL596327.1-201ENST00000603629 213 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AC025811.1-201ENST00000604312 472 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AC112230.1-201ENST00000604342 547 ntBASIC4.9□□□□□ -1.63
NEK3P51956 IGHV3-29-201ENST00000604817 344 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AL360219.1-201ENST00000610230 366 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AL139418.1-201ENST00000613613 177 ntBASIC4.9□□□□□ -1.63
NEK3P51956 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.9□□□□□ -1.63
NEK3P51956 AC025588.4-201ENST00000615802 908 ntBASIC4.9□□□□□ -1.63
NEK3P51956 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.9□□□□□ -1.63
NEK3P51956 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.9□□□□□ -1.63
NEK3P51956 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEK3P51956 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NEK3P51956 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.9□□□□□ -1.63
NEK3P51956 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEK3P51956 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.9□□□□□ -1.63
NEK3P51956 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEK3P51956 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
NEK3P51956 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NEK3P51956 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEK3P51956 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEK3P51956 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.9□□□□□ -1.63
NEK3P51956 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEK3P51956 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEK3P51956 AC000123.3-201ENST00000624029 4975 ntBASIC4.89□□□□□ -1.63
NEK3P51956 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.89□□□□□ -1.63
NEK3P51956 KPNA2P2-201ENST00000419546 1489 ntBASIC4.89□□□□□ -1.63
NEK3P51956 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
NEK3P51956 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NEK3P51956 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NEK3P51956 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.89□□□□□ -1.63
NEK3P51956 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NEK3P51956 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.89□□□□□ -1.63
NEK3P51956 NOL8P1-201ENST00000508336 3529 ntBASIC4.89□□□□□ -1.63
NEK3P51956 AL391994.1-201ENST00000254724 282 ntBASIC4.89□□□□□ -1.63
NEK3P51956 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NEK3P51956 CYB5AP4-201ENST00000396692 399 ntBASIC4.89□□□□□ -1.63
NEK3P51956 RPL31P1-201ENST00000398116 372 ntBASIC4.89□□□□□ -1.63
NEK3P51956 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NEK3P51956 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms