Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.32□□□□□ -2.2
NEBP20929 VTI1BP4-201ENST00000427516 527 ntBASIC1.32□□□□□ -2.2
NEBP20929 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC1.32□□□□□ -2.2
NEBP20929 AL359265.1-201ENST00000440296 795 ntBASIC1.32□□□□□ -2.2
NEBP20929 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.32□□□□□ -2.2
NEBP20929 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1.32□□□□□ -2.2
NEBP20929 RPS17P13-201ENST00000448974 407 ntBASIC1.32□□□□□ -2.2
NEBP20929 RPL12P26-201ENST00000452430 487 ntBASIC1.32□□□□□ -2.2
NEBP20929 SNORD109B-201ENST00000458961 67 ntBASIC1.32□□□□□ -2.2
NEBP20929 SNORD109A-201ENST00000459128 67 ntBASIC1.32□□□□□ -2.2
NEBP20929 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.32□□□□□ -2.2
NEBP20929 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC1.32□□□□□ -2.2
NEBP20929 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC1.32□□□□□ -2.2
NEBP20929 MUC2-202ENST00000613187 4845 ntBASIC1.32□□□□□ -2.2
NEBP20929 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 AL645937.1-201ENST00000641739 1652 ntBASIC1.32□□□□□ -2.2
NEBP20929 Z83843.1-201ENST00000604070 3685 ntBASIC1.32□□□□□ -2.2
NEBP20929 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC1.32□□□□□ -2.2
NEBP20929 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 AL356292.1-201ENST00000283110 373 ntBASIC1.32□□□□□ -2.2
NEBP20929 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 RN7SKP223-201ENST00000410582 62 ntBASIC1.32□□□□□ -2.2
NEBP20929 RN7SKP192-201ENST00000411291 327 ntBASIC1.32□□□□□ -2.2
NEBP20929 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC1.32□□□□□ -2.2
NEBP20929 AC105272.1-201ENST00000438604 198 ntBASIC1.32□□□□□ -2.2
NEBP20929 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC1.32□□□□□ -2.2
NEBP20929 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 AL034370.1-201ENST00000397254 1590 ntBASIC1.32□□□□□ -2.2
NEBP20929 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 AL080315.1-201ENST00000406055 466 ntBASIC1.32□□□□□ -2.2
NEBP20929 RNU6-516P-201ENST00000411381 104 ntBASIC1.32□□□□□ -2.2
NEBP20929 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC1.32□□□□□ -2.2
NEBP20929 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.32□□□□□ -2.2
NEBP20929 U3.44-201ENST00000458938 192 ntBASIC1.32□□□□□ -2.2
NEBP20929 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC1.32□□□□□ -2.2
NEBP20929 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.32□□□□□ -2.2
NEBP20929 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC1.32□□□□□ -2.2
NEBP20929 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC1.32□□□□□ -2.2
NEBP20929 DNAJC8P1-201ENST00000554535 372 ntBASIC1.32□□□□□ -2.2
NEBP20929 SERPINE4P-201ENST00000554978 281 ntBASIC1.32□□□□□ -2.2
NEBP20929 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.32□□□□□ -2.2
NEBP20929 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.32□□□□□ -2.2
NEBP20929 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC1.32□□□□□ -2.2
NEBP20929 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC1.32□□□□□ -2.2
NEBP20929 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC1.32□□□□□ -2.2
NEBP20929 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 RPL7AP73-201ENST00000413490 353 ntBASIC1.32□□□□□ -2.2
NEBP20929 AC063979.1-201ENST00000415539 377 ntBASIC1.32□□□□□ -2.2
NEBP20929 BX119904.1-201ENST00000432026 348 ntBASIC1.32□□□□□ -2.2
NEBP20929 RNF148-202ENST00000447240 839 ntTSL 2 BASIC1.32□□□□□ -2.2
NEBP20929 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEBP20929 VN1R40P-201ENST00000455196 941 ntBASIC1.32□□□□□ -2.2
NEBP20929 RAC1P2-201ENST00000511164 579 ntBASIC1.32□□□□□ -2.2
NEBP20929 AC004696.1-201ENST00000614345 607 ntBASIC1.32□□□□□ -2.2
NEBP20929 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC1.32□□□□□ -2.2
NEBP20929 MFSD8-245ENST00000641743 948 ntBASIC1.32□□□□□ -2.2
NEBP20929 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
NEBP20929 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
NEBP20929 BBX-203ENST00000402543 3980 ntTSL 5 BASIC1.32□□□□□ -2.2
NEBP20929 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 RN7SKP44-201ENST00000363602 316 ntBASIC1.31□□□□□ -2.2
NEBP20929 CYCSP45-201ENST00000402289 315 ntBASIC1.31□□□□□ -2.2
NEBP20929 HDGFP1-201ENST00000405943 252 ntBASIC1.31□□□□□ -2.2
NEBP20929 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC1.31□□□□□ -2.2
NEBP20929 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC1.31□□□□□ -2.2
NEBP20929 AP001317.1-201ENST00000531194 960 ntBASIC1.31□□□□□ -2.2
NEBP20929 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
NEBP20929 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 SAGE4P-201ENST00000442271 3381 ntBASIC1.31□□□□□ -2.2
NEBP20929 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC1.31□□□□□ -2.2
NEBP20929 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 GABPAP-201ENST00000419271 1356 ntBASIC1.31□□□□□ -2.2
NEBP20929 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 SEPT7P8-201ENST00000413308 775 ntBASIC1.31□□□□□ -2.2
NEBP20929 RPL7P38-201ENST00000488396 739 ntBASIC1.31□□□□□ -2.2
NEBP20929 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NEBP20929 AP000560.1-201ENST00000624150 1937 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms