Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC011260.1-201ENST00000578420 472 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
ZIC3O60481 NBR2-204ENST00000587322 63 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 VN1R92P-201ENST00000598511 928 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 RPL26P30-202ENST00000602923 645 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC005191.1-201ENST00000603950 358 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AL359535.1-201ENST00000612100 1087 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC008083.4-201ENST00000615076 444 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC092650.2-201ENST00000619984 902 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC011477.1-204ENST00000623416 1325 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
ZIC3O60481 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.07□□□□□ -1.76
ZIC3O60481 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
ZIC3O60481 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 RNU6-500P-201ENST00000362349 107 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 Y_RNA.318-201ENST00000365131 97 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 RNU6-921P-201ENST00000384361 107 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AL031577.2-201ENST00000404133 280 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 RN7SKP182-201ENST00000410772 298 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.07□□□□□ -1.76
ZIC3O60481 AL356387.2-201ENST00000422272 243 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC012519.1-201ENST00000424588 610 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AL035407.1-201ENST00000429211 571 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 RPL21P91-201ENST00000429231 479 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 VDAC1P6-201ENST00000430062 855 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 RPL36P19-201ENST00000430744 301 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.07□□□□□ -1.76
ZIC3O60481 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.07□□□□□ -1.76
ZIC3O60481 AL445433.1-201ENST00000457507 257 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AP000942.1-201ENST00000463969 747 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 RPL21P126-201ENST00000470049 478 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC104685.1-201ENST00000502445 371 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.07□□□□□ -1.76
ZIC3O60481 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 RAB9BP1-201ENST00000519581 626 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 NPM1P6-201ENST00000521088 871 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC107918.3-201ENST00000533272 382 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.07□□□□□ -1.76
ZIC3O60481 GSTP1P1-201ENST00000548078 319 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AC090502.2-201ENST00000549267 280 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC084824.1-201ENST00000550917 1005 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
ZIC3O60481 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.07□□□□□ -1.76
ZIC3O60481 SULT1C2P1-202ENST00000562418 459 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 MTCYBP33-201ENST00000575007 1130 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC107982.3-201ENST00000584957 985 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 HMGB2P1-201ENST00000591146 634 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.07□□□□□ -1.76
ZIC3O60481 AL356218.2-201ENST00000605264 187 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.07□□□□□ -1.76
ZIC3O60481 AC073530.2-201ENST00000623987 261 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 AC007494.3-201ENST00000624660 743 ntBASIC4.07□□□□□ -1.76
ZIC3O60481 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
ZIC3O60481 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZIC3O60481 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.07□□□□□ -1.76
ZIC3O60481 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms