Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RN7SL464P-201ENST00000492743 297 ntBASIC10.45□□□□□ -0.74
MSH5O43196 ATP5EP1-201ENST00000510257 156 ntBASIC10.45□□□□□ -0.74
MSH5O43196 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC10.45□□□□□ -0.74
MSH5O43196 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC10.45□□□□□ -0.74
MSH5O43196 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
MSH5O43196 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC10.45□□□□□ -0.74
MSH5O43196 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC10.45□□□□□ -0.74
MSH5O43196 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
MSH5O43196 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC10.45□□□□□ -0.74
MSH5O43196 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC10.45□□□□□ -0.74
MSH5O43196 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
MSH5O43196 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
MSH5O43196 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
MSH5O43196 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
MSH5O43196 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
MSH5O43196 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
MSH5O43196 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
MSH5O43196 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
MSH5O43196 CASC19-204ENST00000641001 2055 ntBASIC10.45□□□□□ -0.74
MSH5O43196 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
MSH5O43196 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC10.45□□□□□ -0.74
MSH5O43196 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
MSH5O43196 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC10.44□□□□□ -0.74
MSH5O43196 RMST-210ENST00000640149 2844 ntTSL 5 BASIC10.44□□□□□ -0.74
MSH5O43196 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
MSH5O43196 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
MSH5O43196 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC10.44□□□□□ -0.74
MSH5O43196 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
MSH5O43196 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
MSH5O43196 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
MSH5O43196 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
MSH5O43196 AC010894.1-201ENST00000313760 361 ntBASIC10.44□□□□□ -0.74
MSH5O43196 AL512604.1-201ENST00000404812 257 ntBASIC10.44□□□□□ -0.74
MSH5O43196 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
MSH5O43196 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC10.44□□□□□ -0.74
MSH5O43196 AC097527.1-201ENST00000437031 530 ntBASIC10.44□□□□□ -0.74
MSH5O43196 HIGD1AP2-201ENST00000446367 280 ntBASIC10.44□□□□□ -0.74
MSH5O43196 CREM-242ENST00000490511 469 ntTSL 2 BASIC10.44□□□□□ -0.74
MSH5O43196 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC10.44□□□□□ -0.74
MSH5O43196 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC10.44□□□□□ -0.74
MSH5O43196 IGKV1D-32-201ENST00000517449 318 ntBASIC10.44□□□□□ -0.74
MSH5O43196 IGKV3D-31-201ENST00000519131 281 ntBASIC10.44□□□□□ -0.74
MSH5O43196 NUTF2P2-201ENST00000551207 384 ntBASIC10.44□□□□□ -0.74
MSH5O43196 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC10.44□□□□□ -0.74
MSH5O43196 AC139085.1-201ENST00000582716 182 ntBASIC10.44□□□□□ -0.74
MSH5O43196 GLUD1P2-201ENST00000583339 201 ntBASIC10.44□□□□□ -0.74
MSH5O43196 GLUD1P8-201ENST00000585063 203 ntBASIC10.44□□□□□ -0.74
MSH5O43196 AC005255.1-201ENST00000593748 216 ntBASIC10.44□□□□□ -0.74
MSH5O43196 AC022441.3-201ENST00000605737 136 ntBASIC10.44□□□□□ -0.74
MSH5O43196 AL121985.3-201ENST00000620690 523 ntBASIC10.44□□□□□ -0.74
MSH5O43196 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
MSH5O43196 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
MSH5O43196 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
MSH5O43196 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
MSH5O43196 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
MSH5O43196 PARP1P1-201ENST00000413631 3026 ntBASIC10.44□□□□□ -0.74
MSH5O43196 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC10.44□□□□□ -0.74
MSH5O43196 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
MSH5O43196 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 SALL4P7-201ENST00000555779 3120 ntBASIC10.43□□□□□ -0.74
MSH5O43196 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC10.43□□□□□ -0.74
MSH5O43196 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC10.43□□□□□ -0.74
MSH5O43196 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
MSH5O43196 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC10.43□□□□□ -0.74
MSH5O43196 RNU6-288P-201ENST00000363690 104 ntBASIC10.43□□□□□ -0.74
MSH5O43196 Y_RNA.572-201ENST00000384757 98 ntBASIC10.43□□□□□ -0.74
MSH5O43196 AC008155.1-201ENST00000421078 329 ntBASIC10.43□□□□□ -0.74
MSH5O43196 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC10.43□□□□□ -0.74
MSH5O43196 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC10.43□□□□□ -0.74
MSH5O43196 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC10.43□□□□□ -0.74
MSH5O43196 LINC01085-203ENST00000511195 326 ntBASIC10.43□□□□□ -0.74
MSH5O43196 AC091826.1-201ENST00000514065 313 ntBASIC10.43□□□□□ -0.74
MSH5O43196 SOD1P3-201ENST00000518682 454 ntBASIC10.43□□□□□ -0.74
MSH5O43196 AC073581.1-201ENST00000519036 575 ntBASIC10.43□□□□□ -0.74
MSH5O43196 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC10.43□□□□□ -0.74
MSH5O43196 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC10.43□□□□□ -0.74
MSH5O43196 AC124319.3-201ENST00000616832 526 ntBASIC10.43□□□□□ -0.74
MSH5O43196 AC027506.1-201ENST00000621395 198 ntBASIC10.43□□□□□ -0.74
MSH5O43196 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC10.43□□□□□ -0.74
MSH5O43196 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
MSH5O43196 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
MSH5O43196 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC10.43□□□□□ -0.74
MSH5O43196 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 AC007342.5-201ENST00000571340 2142 ntBASIC10.43□□□□□ -0.74
MSH5O43196 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC10.43□□□□□ -0.74
MSH5O43196 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
MSH5O43196 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC10.43□□□□□ -0.74
MSH5O43196 LRRC2-AS1-201ENST00000599511 2291 ntBASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms