Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDH20Q8N6Y1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDH20Q8N6Y1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 HMGB1P5-201ENST00000255320 642 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 SNORD66.1-201ENST00000391230 76 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 RPS26P8-201ENST00000393490 348 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 RNU2-65P-201ENST00000410162 185 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 NPM1P24-201ENST00000428039 894 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 HMGB1P16-201ENST00000447155 540 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC079776.3-201ENST00000450665 370 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AL121877.1-201ENST00000453704 622 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC079804.1-201ENST00000461922 436 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 RNA5SP154-201ENST00000516193 111 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 SNORA31.9-201ENST00000516429 84 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 OR4A2P-201ENST00000527276 913 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 OR4C2P-201ENST00000530855 1064 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 MRPS36P5-201ENST00000551909 298 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AL442163.2-201ENST00000553912 710 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC022662.1-201ENST00000580252 331 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC092653.1-201ENST00000608509 531 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC019278.1-201ENST00000623516 479 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 MTND2P41-201ENST00000637599 773 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AC134882.1-201ENST00000603738 1676 ntBASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH20Q8N6Y1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AL353743.4-201ENST00000422653 1547 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AL512646.1-201ENST00000269395 1077 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 MIR448-201ENST00000362131 111 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 GSTA8P-201ENST00000404253 637 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 RN7SKP182-201ENST00000410772 298 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 RPL7P34-201ENST00000433316 712 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 ABCF2P2-201ENST00000450549 296 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 VN1R40P-201ENST00000455196 941 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 RPL7P19-201ENST00000469948 618 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AC011979.1-201ENST00000472300 483 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AC068587.1-201ENST00000483613 781 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AC104164.2-201ENST00000496953 495 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 RPS27AP13-201ENST00000498403 237 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AC008885.2-201ENST00000509506 930 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 VWA8P1-201ENST00000510889 176 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AC099522.1-202ENST00000514718 367 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 PHBP17-201ENST00000528576 541 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AC068446.3-201ENST00000555285 382 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AC145350.1-201ENST00000567426 208 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AL731566.2-201ENST00000618971 317 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AP003485.2-201ENST00000623636 610 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AC068057.2-201ENST00000624047 895 ntBASIC4.31□□□□□ -1.72
PCDH20Q8N6Y1 AC008013.2-202ENST00000637965 364 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms