Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC104297.1-201ENST00000393779 870 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.44□□□□□ -1.7
RIPK4P57078 RPL5P19-201ENST00000404228 893 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.44□□□□□ -1.7
RIPK4P57078 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.44□□□□□ -1.7
RIPK4P57078 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 AC005300.1-201ENST00000428401 373 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 XKRYP6-201ENST00000440468 1116 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.44□□□□□ -1.7
RIPK4P57078 XKRYP3-201ENST00000442113 1116 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 RPL31P20-201ENST00000449593 360 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 AC097262.1-201ENST00000452559 548 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.44□□□□□ -1.7
RIPK4P57078 AC091153.1-201ENST00000466297 402 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 AL049830.2-201ENST00000480072 201 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RIPK4P57078 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.44□□□□□ -1.7
RIPK4P57078 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.44□□□□□ -1.7
RIPK4P57078 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.44□□□□□ -1.7
RIPK4P57078 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.44□□□□□ -1.7
RIPK4P57078 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.44□□□□□ -1.7
RIPK4P57078 AC005476.1-201ENST00000554427 397 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.44□□□□□ -1.7
RIPK4P57078 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.44□□□□□ -1.7
RIPK4P57078 CCDC58P3-201ENST00000590792 430 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 AC023813.4-201ENST00000607580 580 ntBASIC4.44□□□□□ -1.7
RIPK4P57078 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.44□□□□□ -1.7
RIPK4P57078 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RIPK4P57078 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RIPK4P57078 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.43□□□□□ -1.7
RIPK4P57078 HSPA8P17-201ENST00000427029 1382 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
RIPK4P57078 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.43□□□□□ -1.7
RIPK4P57078 SNORA70.4-201ENST00000365509 134 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RIPK4P57078 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIPK4P57078 DHFRP5-201ENST00000406944 564 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 AC093084.1-201ENST00000424233 687 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 MTND4LP13-201ENST00000425022 298 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.43□□□□□ -1.7
RIPK4P57078 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.43□□□□□ -1.7
RIPK4P57078 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.43□□□□□ -1.7
RIPK4P57078 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.43□□□□□ -1.7
RIPK4P57078 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.43□□□□□ -1.7
RIPK4P57078 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.43□□□□□ -1.7
RIPK4P57078 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.43□□□□□ -1.7
RIPK4P57078 AC112198.1-201ENST00000505369 1220 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.43□□□□□ -1.7
RIPK4P57078 IGKV2-23-201ENST00000518729 323 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 AC106785.3-201ENST00000564064 847 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.43□□□□□ -1.7
RIPK4P57078 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.43□□□□□ -1.7
RIPK4P57078 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.43□□□□□ -1.7
RIPK4P57078 RNVU1-4-201ENST00000612985 164 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 AC020658.4-201ENST00000613987 684 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.43□□□□□ -1.7
RIPK4P57078 RMST_5.1-201ENST00000618704 126 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RIPK4P57078 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.43□□□□□ -1.7
RIPK4P57078 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.43□□□□□ -1.7
RIPK4P57078 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIPK4P57078 AL133383.2-201ENST00000622958 2336 ntBASIC4.43□□□□□ -1.7
RIPK4P57078 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RIPK4P57078 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RIPK4P57078 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.42□□□□□ -1.7
RIPK4P57078 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RIPK4P57078 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RIPK4P57078 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.42□□□□□ -1.7
RIPK4P57078 snoU13.22-201ENST00000459428 104 ntBASIC4.42□□□□□ -1.7
RIPK4P57078 AC073522.1-201ENST00000483312 377 ntBASIC4.42□□□□□ -1.7
RIPK4P57078 AC021678.1-201ENST00000505195 936 ntBASIC4.42□□□□□ -1.7
RIPK4P57078 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.42□□□□□ -1.7
RIPK4P57078 AC009268.1-201ENST00000561352 1203 ntBASIC4.42□□□□□ -1.7
RIPK4P57078 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.42□□□□□ -1.7
RIPK4P57078 AC007179.3-201ENST00000604976 235 ntBASIC4.42□□□□□ -1.7
RIPK4P57078 AC004241.3-201ENST00000611728 517 ntBASIC4.42□□□□□ -1.7
RIPK4P57078 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.42□□□□□ -1.7
RIPK4P57078 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.42□□□□□ -1.7
RIPK4P57078 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RIPK4P57078 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.42□□□□□ -1.7
RIPK4P57078 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIPK4P57078 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIPK4P57078 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RIPK4P57078 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RIPK4P57078 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.41□□□□□ -1.7
RIPK4P57078 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIPK4P57078 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIPK4P57078 RNU6-1251P-201ENST00000364502 107 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 SNORA62.2-201ENST00000364672 152 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 RNU4-7P-201ENST00000364758 141 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 RNU6-1279P-201ENST00000383917 103 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 PTMAP5-201ENST00000393073 333 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.41□□□□□ -1.7
RIPK4P57078 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.41□□□□□ -1.7
RIPK4P57078 AC006946.1-201ENST00000429106 328 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 AC005326.1-201ENST00000429197 123 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 MTCO1P45-201ENST00000431457 267 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.41□□□□□ -1.7
RIPK4P57078 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.41□□□□□ -1.7
RIPK4P57078 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms