Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH4P55283 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH4P55283 AC079610.2-201ENST00000604818 690 ntBASIC3.81□□□□□ -1.8
CDH4P55283 AC011374.2-201ENST00000607135 526 ntBASIC3.81□□□□□ -1.8
CDH4P55283 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH4P55283 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
CDH4P55283 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH4P55283 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH4P55283 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH4P55283 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
CDH4P55283 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH4P55283 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH4P55283 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CDH4P55283 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH4P55283 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH4P55283 AC018555.1-201ENST00000567548 1980 ntBASIC3.8□□□□□ -1.8
CDH4P55283 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CDH4P55283 MTND4P10-201ENST00000446199 1363 ntBASIC3.8□□□□□ -1.8
CDH4P55283 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH4P55283 SNORA62.3-201ENST00000365110 153 ntBASIC3.8□□□□□ -1.8
CDH4P55283 SNORD6-201ENST00000365444 73 ntBASIC3.8□□□□□ -1.8
CDH4P55283 SNORD3H-201ENST00000384486 214 ntBASIC3.8□□□□□ -1.8
CDH4P55283 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CDH4P55283 PTMAP2-201ENST00000397627 327 ntBASIC3.8□□□□□ -1.8
CDH4P55283 RPL7P60-201ENST00000397636 735 ntBASIC3.8□□□□□ -1.8
CDH4P55283 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH4P55283 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CDH4P55283 PTP4A1P5-201ENST00000420305 455 ntBASIC3.8□□□□□ -1.8
CDH4P55283 AL035423.1-201ENST00000420331 213 ntBASIC3.8□□□□□ -1.8
CDH4P55283 USP12PY-201ENST00000427677 1064 ntBASIC3.8□□□□□ -1.8
CDH4P55283 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH4P55283 BMS1P19-201ENST00000433925 393 ntBASIC3.8□□□□□ -1.8
CDH4P55283 RPS7P5-201ENST00000441482 581 ntBASIC3.8□□□□□ -1.8
CDH4P55283 MTND5P8-201ENST00000449817 1083 ntBASIC3.8□□□□□ -1.8
CDH4P55283 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH4P55283 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH4P55283 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH4P55283 NDUFB4P9-201ENST00000511646 388 ntBASIC3.8□□□□□ -1.8
CDH4P55283 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH4P55283 OR5AK3P-201ENST00000527486 1297 ntBASIC3.8□□□□□ -1.8
CDH4P55283 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH4P55283 MIR3158-1-201ENST00000583596 81 ntBASIC3.8□□□□□ -1.8
CDH4P55283 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH4P55283 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH4P55283 NTAN1P1-201ENST00000603150 646 ntBASIC3.8□□□□□ -1.8
CDH4P55283 AC245389.1-201ENST00000605141 529 ntBASIC3.8□□□□□ -1.8
CDH4P55283 BRDTP1-201ENST00000605735 677 ntBASIC3.8□□□□□ -1.8
CDH4P55283 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH4P55283 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH4P55283 MIR6864-201ENST00000617935 70 ntBASIC3.8□□□□□ -1.8
CDH4P55283 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH4P55283 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH4P55283 AC012442.3-202ENST00000636742 206 ntBASIC3.8□□□□□ -1.8
CDH4P55283 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH4P55283 AP000553.6-201ENST00000641242 118 ntBASIC3.8□□□□□ -1.8
CDH4P55283 ZNF285B-201ENST00000561698 1767 ntBASIC3.8□□□□□ -1.8
CDH4P55283 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH4P55283 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH4P55283 ZNF33CP-201ENST00000432492 2030 ntBASIC3.8□□□□□ -1.8
CDH4P55283 NMD3P1-201ENST00000439704 1488 ntBASIC3.79□□□□□ -1.8
CDH4P55283 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH4P55283 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH4P55283 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CDH4P55283 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CDH4P55283 AL353692.2-201ENST00000407054 335 ntBASIC3.79□□□□□ -1.8
CDH4P55283 RN7SKP56-201ENST00000410513 331 ntBASIC3.79□□□□□ -1.8
CDH4P55283 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH4P55283 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH4P55283 AC017083.1-201ENST00000428093 483 ntBASIC3.79□□□□□ -1.8
CDH4P55283 RPL37P1-201ENST00000432310 284 ntBASIC3.79□□□□□ -1.8
CDH4P55283 USP9YP7-201ENST00000436723 430 ntBASIC3.79□□□□□ -1.8
CDH4P55283 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH4P55283 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH4P55283 AC239367.2-201ENST00000447309 705 ntBASIC3.79□□□□□ -1.8
CDH4P55283 USP9YP32-201ENST00000452432 430 ntBASIC3.79□□□□□ -1.8
CDH4P55283 CABYRP1-201ENST00000465493 1045 ntBASIC3.79□□□□□ -1.8
CDH4P55283 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH4P55283 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH4P55283 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH4P55283 Vault.1-201ENST00000516474 102 ntBASIC3.79□□□□□ -1.8
CDH4P55283 SNORA67.7-201ENST00000516664 135 ntBASIC3.79□□□□□ -1.8
CDH4P55283 CIR1P1-201ENST00000524055 1133 ntBASIC3.79□□□□□ -1.8
CDH4P55283 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH4P55283 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH4P55283 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH4P55283 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH4P55283 AC092747.2-201ENST00000545069 983 ntBASIC3.79□□□□□ -1.8
CDH4P55283 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH4P55283 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH4P55283 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH4P55283 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH4P55283 HMGB1P50-201ENST00000605814 607 ntBASIC3.79□□□□□ -1.8
CDH4P55283 AC100814.1-201ENST00000606963 623 ntBASIC3.79□□□□□ -1.8
CDH4P55283 AC006133.1-201ENST00000617106 264 ntBASIC3.79□□□□□ -1.8
CDH4P55283 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH4P55283 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CDH4P55283 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH4P55283 U6.107-201ENST00000637108 79 ntBASIC3.79□□□□□ -1.8
CDH4P55283 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH4P55283 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms