Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 Z75741.1-201ENST00000446793 314 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 AC104629.2-201ENST00000468627 598 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.48□□□□□ -1.85
CXCL12P48061 RN7SKP209-201ENST00000516888 304 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 IGLVIV-53-201ENST00000520107 367 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 AL121594.4-201ENST00000556211 1196 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 AC022146.1-201ENST00000595307 847 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 AC016911.1-201ENST00000613297 452 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.48□□□□□ -1.85
CXCL12P48061 AL732372.2-225ENST00000642124 456 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 OTUD4P1-201ENST00000237841 3067 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL12P48061 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL12P48061 AC058791.1-201ENST00000608412 3198 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.48□□□□□ -1.85
CXCL12P48061 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.48□□□□□ -1.85
CXCL12P48061 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.48□□□□□ -1.85
CXCL12P48061 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.48□□□□□ -1.85
CXCL12P48061 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CXCL12P48061 AC008725.1-201ENST00000605123 2263 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL12P48061 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL12P48061 PHKBP1-201ENST00000450951 1951 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 MIR421-201ENST00000365696 85 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 AC083799.1-201ENST00000366451 910 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL12P48061 RPS20P25-201ENST00000412447 352 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 AL353678.1-201ENST00000422735 741 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 USP9YP36-201ENST00000424581 829 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 OSTCP5-201ENST00000425293 453 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL12P48061 AC022022.1-201ENST00000430304 178 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 USP9YP31-201ENST00000431405 881 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL12P48061 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL12P48061 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL12P48061 PCNAP1-201ENST00000505363 709 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL12P48061 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL12P48061 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL12P48061 AC135001.1-201ENST00000544546 283 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL12P48061 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL12P48061 AC004024.1-201ENST00000549244 247 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 AC087888.1-201ENST00000550884 1254 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.47□□□□□ -1.85
CXCL12P48061 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.47□□□□□ -1.85
CXCL12P48061 AC245128.3-201ENST00000594721 748 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 EIF1P6-201ENST00000600054 334 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.47□□□□□ -1.85
CXCL12P48061 MTCO3P22-201ENST00000603219 784 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.47□□□□□ -1.85
CXCL12P48061 AC092159.4-201ENST00000624944 550 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CXCL12P48061 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CXCL12P48061 AC007656.2-201ENST00000624902 4547 ntBASIC3.47□□□□□ -1.85
CXCL12P48061 AL592437.2-201ENST00000421655 2434 ntBASIC3.46□□□□□ -1.85
CXCL12P48061 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL12P48061 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL12P48061 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL12P48061 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL12P48061 GSTA8P-201ENST00000404253 637 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 RNU4-47P-201ENST00000410876 114 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 AC099336.2-201ENST00000422457 254 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 SEC63P1-201ENST00000425785 1258 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL12P48061 Z99127.2-201ENST00000441426 334 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 CALM1P2-201ENST00000452941 448 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 AC099560.2-201ENST00000457554 255 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL12P48061 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL12P48061 OR4V1P-201ENST00000525394 1140 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL12P48061 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL12P48061 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL12P48061 AC067805.1-201ENST00000559344 470 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.46□□□□□ -1.86
CXCL12P48061 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.46□□□□□ -1.86
CXCL12P48061 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL12P48061 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.46□□□□□ -1.86
CXCL12P48061 BX322635.1-201ENST00000605804 496 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 AP003392.5-201ENST00000607857 415 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL12P48061 AC091905.1-201ENST00000624400 311 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 AC119674.1-220ENST00000641502 1048 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL12P48061 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL12P48061 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL12P48061 NMD3P1-201ENST00000439704 1488 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 AC095050.2-201ENST00000510748 1458 ntBASIC3.46□□□□□ -1.86
CXCL12P48061 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL12P48061 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL12P48061 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.45□□□□□ -1.86
CXCL12P48061 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CXCL12P48061 AC110792.3-201ENST00000595906 1614 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms