Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AL109741.3-201ENST00000561748 592 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC008638.3-201ENST00000603341 463 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC244100.1-202ENST00000621554 382 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC004777.1-201ENST00000624317 287 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC106858.1-201ENST00000637497 429 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC138393.1-206ENST00000540997 1886 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 SNORA63.3-201ENST00000362682 132 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 SNORD6-201ENST00000365444 73 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 RNU6-609P-201ENST00000365459 107 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 MIR7-3-201ENST00000384898 110 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AL138878.1-201ENST00000405131 347 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 RNU2-17P-201ENST00000410290 190 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 VN1R42P-201ENST00000424651 344 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC091286.1-201ENST00000431233 461 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC011742.1-201ENST00000431448 434 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 USP9YP7-201ENST00000436723 430 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 TPTE2P3-201ENST00000441562 1189 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 SETD6P1-201ENST00000444575 317 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AL451050.1-201ENST00000450126 415 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 USP9YP32-201ENST00000452432 430 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC104629.1-201ENST00000494226 508 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 CIR1P1-201ENST00000524055 1133 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 GTF2IP22-201ENST00000554443 182 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC079880.2-201ENST00000603790 1213 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC120053.1-201ENST00000607706 736 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC103710.3-201ENST00000608157 948 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AL391834.1-201ENST00000609609 560 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AP001033.2-201ENST00000609701 1003 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 MIR8084-201ENST00000614105 89 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AL391261.4-201ENST00000616012 481 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC009093.8-201ENST00000641769 292 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 AC025125.1-201ENST00000624743 1922 ntBASIC3.76□□□□□ -1.81
APOBEC3BQ9UH17 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 AC024560.2-201ENST00000507981 1497 ntBASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 MIR16-2-201ENST00000362117 81 ntBASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 SNORD46.1-201ENST00000364139 104 ntBASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 RNA5SP167-201ENST00000365461 116 ntBASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 SNORD3H-201ENST00000384486 214 ntBASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 MIR320B1-201ENST00000390209 79 ntBASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 AC007066.1-201ENST00000392902 381 ntBASIC3.75□□□□□ -1.81
APOBEC3BQ9UH17 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms