Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC064801.1-201ENST00000612025 407 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 AC073592.6-201ENST00000624271 415 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 AC135068.11-201ENST00000636378 921 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 SAMMSON-222ENST00000641901 2727 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 AC110597.1-201ENST00000562669 3176 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 RNU1-130P-201ENST00000363930 160 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 MIR27A-201ENST00000385073 78 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 ZNF37CP-201ENST00000406795 241 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 RNA5SP177-201ENST00000410122 107 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 SYF2P2-201ENST00000417620 583 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 AC127537.1-201ENST00000418183 748 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 NME1P1-201ENST00000420914 382 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 PTPN2P1-201ENST00000423212 1072 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 C4BPAP2-201ENST00000428434 478 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 OR3D1P-201ENST00000438288 955 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 NDUFB1P2-201ENST00000449477 176 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 AL138752.1-201ENST00000452964 351 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 RPL7AP30-201ENST00000482859 796 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 CHCHD2P7-201ENST00000508008 452 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 RNU6-347P-201ENST00000516658 105 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 RPL10P18-201ENST00000519384 309 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 HMGN1P28-201ENST00000521340 364 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 AC012339.2-201ENST00000523996 453 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 AP003084.1-201ENST00000524828 742 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 RPSAP66-201ENST00000592196 606 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 AC022467.1-201ENST00000614738 749 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 HSPA8P11-201ENST00000508840 1898 ntBASIC6.38□□□□□ -1.39
USB1Q9BQ65 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USB1Q9BQ65 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
USB1Q9BQ65 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
USB1Q9BQ65 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.37□□□□□ -1.39
USB1Q9BQ65 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 CYP2G2P-201ENST00000594920 1485 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 RBPJP2-201ENST00000618187 1444 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
USB1Q9BQ65 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms