Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.29□□□□□ -1.56
TOPBP1Q92547 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TOPBP1Q92547 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TOPBP1Q92547 KATNBL1P2-201ENST00000433311 835 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 AC010306.1-201ENST00000523223 1117 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 AL139174.1-201ENST00000531489 886 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.28□□□□□ -1.56
TOPBP1Q92547 ELOCP29-201ENST00000588193 334 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.28□□□□□ -1.56
TOPBP1Q92547 MIR486-1-201ENST00000612171 68 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 IGHVIII-44-202ENST00000636235 289 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 ZNF826P-207ENST00000622273 1910 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 AC090971.4-201ENST00000560291 1800 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TOPBP1Q92547 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TOPBP1Q92547 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TOPBP1Q92547 AL445529.1-201ENST00000398713 389 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 Z93242.1-201ENST00000427102 353 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 AC108734.1-201ENST00000439549 399 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 RPS24P13-201ENST00000442520 397 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.28□□□□□ -1.56
TOPBP1Q92547 FCF1P3-201ENST00000496394 590 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.28□□□□□ -1.56
TOPBP1Q92547 AL353600.1-201ENST00000608148 251 ntBASIC5.28□□□□□ -1.56
TOPBP1Q92547 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TOPBP1Q92547 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TOPBP1Q92547 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.27□□□□□ -1.57
TOPBP1Q92547 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.27□□□□□ -1.57
TOPBP1Q92547 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TOPBP1Q92547 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.27□□□□□ -1.57
TOPBP1Q92547 AC104446.1-201ENST00000613728 1321 ntBASIC5.27□□□□□ -1.57
TOPBP1Q92547 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.27□□□□□ -1.57
TOPBP1Q92547 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.27□□□□□ -1.57
TOPBP1Q92547 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TOPBP1Q92547 SNORA18.3-201ENST00000384122 132 ntBASIC5.27□□□□□ -1.57
TOPBP1Q92547 BTF3P9-201ENST00000418784 283 ntBASIC5.27□□□□□ -1.57
TOPBP1Q92547 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.27□□□□□ -1.57
TOPBP1Q92547 BX276092.4-201ENST00000452056 248 ntBASIC5.27□□□□□ -1.57
TOPBP1Q92547 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.27□□□□□ -1.57
TOPBP1Q92547 AC126389.1-201ENST00000477436 290 ntBASIC5.27□□□□□ -1.57
TOPBP1Q92547 AP000859.1-201ENST00000525536 307 ntBASIC5.27□□□□□ -1.57
TOPBP1Q92547 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TOPBP1Q92547 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.27□□□□□ -1.57
TOPBP1Q92547 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.27□□□□□ -1.57
TOPBP1Q92547 AC009948.4-201ENST00000604692 675 ntBASIC5.27□□□□□ -1.57
TOPBP1Q92547 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.27□□□□□ -1.57
TOPBP1Q92547 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TOPBP1Q92547 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TOPBP1Q92547 AC005261.6-201ENST00000623072 1387 ntBASIC5.26□□□□□ -1.57
TOPBP1Q92547 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
TOPBP1Q92547 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.26□□□□□ -1.57
TOPBP1Q92547 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.26□□□□□ -1.57
TOPBP1Q92547 RPSAP41-201ENST00000439695 860 ntBASIC5.26□□□□□ -1.57
TOPBP1Q92547 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC5.26□□□□□ -1.57
TOPBP1Q92547 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
TOPBP1Q92547 AC107934.2-201ENST00000518653 310 ntBASIC5.26□□□□□ -1.57
TOPBP1Q92547 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TOPBP1Q92547 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.26□□□□□ -1.57
TOPBP1Q92547 CYCSP41-201ENST00000616920 296 ntBASIC5.26□□□□□ -1.57
TOPBP1Q92547 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
TOPBP1Q92547 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TOPBP1Q92547 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TOPBP1Q92547 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.26□□□□□ -1.57
TOPBP1Q92547 AC138393.1-206ENST00000540997 1886 ntBASIC5.25□□□□□ -1.57
TOPBP1Q92547 AC096644.4-201ENST00000563417 2912 ntBASIC5.25□□□□□ -1.57
TOPBP1Q92547 AL391417.1-201ENST00000404100 426 ntBASIC5.25□□□□□ -1.57
TOPBP1Q92547 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.25□□□□□ -1.57
TOPBP1Q92547 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.25□□□□□ -1.57
TOPBP1Q92547 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.25□□□□□ -1.57
TOPBP1Q92547 RPL23AP67-201ENST00000465341 474 ntBASIC5.25□□□□□ -1.57
TOPBP1Q92547 HMGB1P3-201ENST00000502802 616 ntBASIC5.25□□□□□ -1.57
TOPBP1Q92547 SNORA70.19-201ENST00000516717 90 ntBASIC5.25□□□□□ -1.57
TOPBP1Q92547 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.25□□□□□ -1.57
TOPBP1Q92547 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TOPBP1Q92547 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.25□□□□□ -1.57
TOPBP1Q92547 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.25□□□□□ -1.57
TOPBP1Q92547 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TOPBP1Q92547 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TOPBP1Q92547 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TOPBP1Q92547 AL132656.3-201ENST00000606384 1595 ntBASIC5.25□□□□□ -1.57
TOPBP1Q92547 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TOPBP1Q92547 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TOPBP1Q92547 REREP1Y-201ENST00000422655 198 ntBASIC5.24□□□□□ -1.57
TOPBP1Q92547 REREP2Y-201ENST00000439103 200 ntBASIC5.24□□□□□ -1.57
TOPBP1Q92547 AC112492.1-201ENST00000449607 712 ntBASIC5.24□□□□□ -1.57
TOPBP1Q92547 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.24□□□□□ -1.57
TOPBP1Q92547 DNAJC19P1-201ENST00000455312 319 ntBASIC5.24□□□□□ -1.57
TOPBP1Q92547 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.24□□□□□ -1.57
TOPBP1Q92547 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
TOPBP1Q92547 AL022311.1-201ENST00000623726 19416 ntBASIC5.24□□□□□ -1.57
TOPBP1Q92547 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.24□□□□□ -1.57
TOPBP1Q92547 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
TOPBP1Q92547 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.24□□□□□ -1.57
TOPBP1Q92547 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TOPBP1Q92547 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TOPBP1Q92547 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.24□□□□□ -1.57
TOPBP1Q92547 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.23□□□□□ -1.57
TOPBP1Q92547 HMGB3P18-201ENST00000406327 590 ntBASIC5.23□□□□□ -1.57
TOPBP1Q92547 RPL7P36-201ENST00000444633 681 ntBASIC5.23□□□□□ -1.57
TOPBP1Q92547 RPL37P4-201ENST00000448908 268 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms