Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC011472.4-201ENST00000615848 491 ntBASIC4.94□□□□□ -1.62
SLC44A3Q8N4M1 AC069209.1-201ENST00000619282 651 ntBASIC4.94□□□□□ -1.62
SLC44A3Q8N4M1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC44A3Q8N4M1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A3Q8N4M1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A3Q8N4M1 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A3Q8N4M1 DCAF13P3-201ENST00000561147 1334 ntBASIC4.94□□□□□ -1.62
SLC44A3Q8N4M1 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.94□□□□□ -1.62
SLC44A3Q8N4M1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 RNU6-1339P-201ENST00000363574 91 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 SNORA4.1-201ENST00000364263 144 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 HSPD1P16-201ENST00000402302 394 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 DPY19L1P2-201ENST00000426647 915 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 RPS25P9-201ENST00000435591 252 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 RPL7P29-201ENST00000437151 728 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 LARP1BP3-201ENST00000437229 869 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 DNAJC19P4-201ENST00000440115 345 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC093155.1-201ENST00000440164 826 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AL671855.1-201ENST00000446875 1203 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 COX6CP18-201ENST00000448769 222 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC027673.1-201ENST00000456245 405 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 RNA5SP269-201ENST00000459032 137 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 RPS17P2-201ENST00000461663 408 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 MTND1P16-201ENST00000465177 898 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC091868.1-201ENST00000508746 304 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC109464.2-201ENST00000510242 943 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 RNU1-6P-201ENST00000516290 144 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 TPRKBP2-201ENST00000565969 475 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC092325.1-201ENST00000566449 554 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 MIR4719-201ENST00000585233 84 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC068276.1-201ENST00000605793 379 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC009951.1-201ENST00000623674 2614 ntBASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.93□□□□□ -1.62
SLC44A3Q8N4M1 AC245100.2-201ENST00000454544 1679 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 HMGB1P5-201ENST00000255320 642 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 FGF7P2-201ENST00000332473 296 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 Y_RNA.18-201ENST00000362461 102 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 RNU6-249P-201ENST00000363016 102 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 RNU6-694P-201ENST00000364071 147 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 RNU6-1263P-201ENST00000384601 106 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 RNY3P10-201ENST00000384764 102 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 OR6C69P-201ENST00000394268 893 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 LINC00993-201ENST00000420453 540 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 RPS27AP12-201ENST00000429552 465 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 CBX1P1-201ENST00000440184 427 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 EPS15P1-201ENST00000448836 336 ntBASIC4.92□□□□□ -1.62
SLC44A3Q8N4M1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms