Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC090686.1-201ENST00000481577 749 ntBASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AC083829.1-201ENST00000503756 657 ntBASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AC111000.2-201ENST00000507775 550 ntBASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 RNY4P37-201ENST00000516225 96 ntBASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 IGLVIV-65-201ENST00000517313 360 ntBASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AC107918.3-201ENST00000533272 382 ntBASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AL358072.1-201ENST00000604156 575 ntBASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AC112220.3-201ENST00000605502 502 ntBASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.6□□□□□ -1.67
TBC1D3FA6NER0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 Y_RNA.25-201ENST00000362528 102 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 UBBP2-201ENST00000376781 231 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 RNU6-178P-201ENST00000384631 104 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 ARL4AP5-201ENST00000404372 599 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 U3.35-201ENST00000408405 208 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 RNU4-25P-201ENST00000410569 230 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 EIF4HP2-201ENST00000424380 563 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 OR2AH1P-201ENST00000425717 928 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 RPL36P19-201ENST00000430744 301 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 UBE2V1P1-201ENST00000430836 445 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AL513185.3-201ENST00000433335 1300 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC023347.2-201ENST00000433994 462 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 HMGN3P1-201ENST00000453847 193 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 RPL23AP24-201ENST00000458203 385 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC112206.1-201ENST00000468416 477 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 HMGB1P28-201ENST00000507778 552 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 ARL2BPP5-201ENST00000523141 481 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 OR5AK1P-201ENST00000524837 922 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC074051.3-201ENST00000570238 358 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 SNORD39.3-201ENST00000584451 71 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AL590392.1-201ENST00000604960 446 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC069304.2-201ENST00000605154 435 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC124312.4-201ENST00000605533 310 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 HSPE1P14-201ENST00000605812 302 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AC012409.3-201ENST00000611343 981 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AL359535.1-201ENST00000612100 1087 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AL136981.2-201ENST00000617319 734 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 AL672167.1-204ENST00000641875 3017 ntBASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
TBC1D3FA6NER0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TBC1D3FA6NER0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.59□□□□□ -1.68
TBC1D3FA6NER0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.59□□□□□ -1.68
TBC1D3FA6NER0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TBC1D3FA6NER0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TBC1D3FA6NER0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TBC1D3FA6NER0 AL022393.1-201ENST00000625142 1677 ntBASIC4.58□□□□□ -1.68
TBC1D3FA6NER0 AL391684.1-202ENST00000641293 1636 ntBASIC4.58□□□□□ -1.68
TBC1D3FA6NER0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
TBC1D3FA6NER0 RNU6-216P-201ENST00000363282 104 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms