Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 FTH1P24-201ENST00000503502 462 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS11Q9H270 AC048346.1-201ENST00000510247 144 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS11Q9H270 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS11Q9H270 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS11Q9H270 AL352979.3-201ENST00000553515 247 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS11Q9H270 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS11Q9H270 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS11Q9H270 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS11Q9H270 AC009597.2-201ENST00000604659 592 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS11Q9H270 AC015914.2-201ENST00000618167 288 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS11Q9H270 AC025048.6-202ENST00000627667 438 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS11Q9H270 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS11Q9H270 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS11Q9H270 AC114546.3-201ENST00000623582 1734 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
VPS11Q9H270 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS11Q9H270 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS11Q9H270 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS11Q9H270 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS11Q9H270 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS11Q9H270 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS11Q9H270 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.24□□□□□ -1.57
VPS11Q9H270 PANDAR-201ENST00000629595 1506 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS11Q9H270 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
VPS11Q9H270 RNU6-839P-201ENST00000363347 108 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 RNU6-560P-201ENST00000364007 108 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 AL359643.1-201ENST00000404109 423 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS11Q9H270 OR4K12P-201ENST00000406538 961 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
VPS11Q9H270 RPS20P15-201ENST00000412792 311 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS11Q9H270 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS11Q9H270 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS11Q9H270 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS11Q9H270 USP9YP9-201ENST00000429406 715 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS11Q9H270 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AC023347.2-201ENST00000433994 462 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 CEACAMP1-201ENST00000434624 1035 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 RPS20P1-201ENST00000434853 354 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 CLUHP1-201ENST00000435012 1190 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 PPIAP17-201ENST00000438507 471 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 GEMIN8P3-201ENST00000445417 720 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 GAPDHP25-201ENST00000447061 1001 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 AC079776.3-201ENST00000450665 370 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 OR6C5P-201ENST00000452388 923 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS11Q9H270 AP000942.1-201ENST00000463969 747 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 RN7SL189P-201ENST00000468631 289 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AC013828.1-201ENST00000481845 158 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 AC090638.1-201ENST00000498296 909 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 HMGB3P16-201ENST00000508037 287 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS11Q9H270 AC010587.2-201ENST00000511727 448 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS11Q9H270 RNU6-488P-201ENST00000515918 99 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS11Q9H270 RN7SL708P-201ENST00000580952 299 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS11Q9H270 UBE2V2P2-201ENST00000587677 504 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS11Q9H270 YWHAQP7-201ENST00000603536 658 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 AL049634.3-201ENST00000604968 457 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS11Q9H270 AC131902.3-201ENST00000611767 581 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 MIR7844-201ENST00000616161 122 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 AC037198.3-201ENST00000616754 526 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 MIR6778-201ENST00000617912 73 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS11Q9H270 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS11Q9H270 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VPS11Q9H270 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS11Q9H270 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS11Q9H270 TEX21P-201ENST00000447107 1476 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 AC011447.7-201ENST00000624228 1590 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 DBF4P1-201ENST00000412976 1892 ntBASIC5.24□□□□□ -1.57
VPS11Q9H270 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms