Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 PTMAP5-201ENST00000393073 333 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AP000567.1-201ENST00000406413 156 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 SLC25A20P1-201ENST00000408043 903 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 CDKN2AIPNLP3-201ENST00000418361 309 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AL671883.1-201ENST00000421191 306 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 RPS12P2-201ENST00000439728 269 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC246785.1-201ENST00000440916 264 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 SPINT5P-201ENST00000448174 155 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC000067.1-201ENST00000452326 287 ntTSL 3 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 IGLV2-5-201ENST00000522922 277 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 VPS28-204ENST00000526054 892 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC004812.1-201ENST00000540773 146 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AL121988.1-201ENST00000542839 560 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 LINC01579-203ENST00000555023 400 ntTSL 3 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 TRAV33-201ENST00000557514 338 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC019294.2-201ENST00000565686 553 ntTSL 4 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 RPL36-204ENST00000579446 452 ntTSL 2 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC006504.5-205ENST00000588318 432 ntTSL 3 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC117498.3-201ENST00000605409 511 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC113349.2-201ENST00000607804 377 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AL627230.6-201ENST00000611129 280 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC100757.2-201ENST00000622316 280 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 RRP12-202ENST00000370992 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 REN-202ENST00000638118 1488 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 MCOLN3-203ENST00000370589 2756 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 GRM1-207ENST00000507907 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 NLRP1-216ENST00000617618 4788 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 TOGARAM1-202ENST00000361577 6247 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 PTPRK-205ENST00000368213 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 ABCC5-201ENST00000265586 5712 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 NRAP-202ENST00000360478 5426 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 SLC12A8-201ENST00000393469 3447 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 AC055716.2-201ENST00000552545 2441 ntBASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 GRAMD1B-206ENST00000529432 6266 ntTSL 2 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 PGM2L1-201ENST00000298198 8515 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 FAXC-201ENST00000389677 11508 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP3-3Q9BYR6 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 PFKM-210ENST00000547587 2867 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 PRDM15-202ENST00000398548 6654 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 TBPL1-201ENST00000237264 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 SLC24A1-201ENST00000261892 5768 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 AL139811.1-201ENST00000424779 2299 ntBASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
KRTAP3-3Q9BYR6 ZDHHC15-203ENST00000541184 6012 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 PCYT1B-203ENST00000379145 5307 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 NSMAF-201ENST00000038176 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 SEMA4D-202ENST00000356444 4503 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 NCAM1-201ENST00000316851 5837 ntTSL 5 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 MRPL55-204ENST00000348259 661 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 Y_RNA.37-201ENST00000362606 108 ntBASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 RNU6-743P-201ENST00000364151 106 ntBASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 Y_RNA.440-201ENST00000384120 114 ntBASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 GPS2P1-201ENST00000411761 986 ntBASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 AC090844.1-201ENST00000422019 156 ntBASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 AC099677.2-201ENST00000436385 175 ntBASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 HMGN2P20-201ENST00000437531 273 ntBASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 IGKV1-37-201ENST00000465170 398 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 LINC02004-201ENST00000482019 294 ntTSL 2 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 IGKV1D-37-201ENST00000509129 353 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 AC108729.3-201ENST00000513484 108 ntBASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 RNU4ATAC12P-201ENST00000516460 113 ntBASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 AL662844.2-201ENST00000538455 284 ntBASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 ARHGDIB-206ENST00000541546 859 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 BTNL2-205ENST00000544175 845 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP3-3Q9BYR6 AC025161.1-201ENST00000552481 591 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms