Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 AL359535.1-201ENST00000612100 1087 ntBASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 RNA5SP39-201ENST00000411245 120 ntBASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 RN7SKP199-201ENST00000410325 305 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 SCARNA20.6-201ENST00000517251 106 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC009812.2-201ENST00000517657 457 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 ATP5F1P7-201ENST00000567330 760 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 LSM1P2-201ENST00000604911 322 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 MTND4P22-201ENST00000413116 1169 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AL591806.2-201ENST00000433122 173 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC008264.1-201ENST00000447612 367 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC087888.1-201ENST00000550884 1254 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AADACP1-206ENST00000561502 1193 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 BNIP3P8-201ENST00000597863 560 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC046144.1-201ENST00000478559 1853 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 RPL36AP21-201ENST00000490372 323 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 DUXAP6-201ENST00000553858 601 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 MAPK10-362ENST00000641864 4484 ntBASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.7□□□□□ -1.98
CSMD1Q96PZ7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AC139713.2-215ENST00000641428 5037 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 Z95331.1-201ENST00000623075 23112 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 Y_RNA.118-201ENST00000363300 101 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 SMC4P1-201ENST00000414479 527 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 HIGD1AP12-201ENST00000427832 281 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AC022018.1-201ENST00000430685 241 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AL513328.1-201ENST00000446460 224 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 RPS26P15-201ENST00000488067 348 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AL358913.1-201ENST00000554342 121 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AC009097.3-201ENST00000563557 1018 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AC015849.2-201ENST00000605738 409 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 Y_RNA.4-201ENST00000362333 112 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 YWHAEP5-201ENST00000431545 765 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AC124856.1-201ENST00000600819 896 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AC103710.3-201ENST00000608157 948 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AL669942.2-201ENST00000620352 697 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AC117434.1-201ENST00000419971 836 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AC092809.1-201ENST00000441469 474 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.69□□□□□ -1.98
CSMD1Q96PZ7 HMGB3P22-202ENST00000451823 572 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms