Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL136981.2-201ENST00000617319 734 ntBASIC5.29□□□□□ -1.56
PRPF3O43395 AC067852.7-201ENST00000623270 535 ntBASIC5.29□□□□□ -1.56
PRPF3O43395 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
PRPF3O43395 DHX40P1-201ENST00000588725 1412 ntBASIC5.29□□□□□ -1.56
PRPF3O43395 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF3O43395 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF3O43395 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF3O43395 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF3O43395 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF3O43395 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
PRPF3O43395 AL592148.3-201ENST00000608771 2646 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF3O43395 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PRPF3O43395 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF3O43395 AC093591.2-201ENST00000565254 3843 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF3O43395 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF3O43395 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF3O43395 OR4K15-201ENST00000305051 1216 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 FAM3C2-201ENST00000312214 681 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 RNU4-44P-201ENST00000363050 141 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 MIR1284-201ENST00000408337 120 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF3O43395 RAD23BP1-201ENST00000421404 1227 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 AL138785.1-201ENST00000425821 331 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 AC234781.2-201ENST00000426370 994 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 AL035407.1-201ENST00000429211 571 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF3O43395 AL365396.1-201ENST00000430854 671 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF3O43395 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF3O43395 MTND5P2-201ENST00000442927 1142 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 AC011753.3-201ENST00000443436 406 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 MTCYBP3-201ENST00000445588 1137 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 RPL26P28-201ENST00000451325 435 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 RPS4XP18-201ENST00000495480 763 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
PRPF3O43395 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.28□□□□□ -1.56
PRPF3O43395 AC114981.1-201ENST00000503897 678 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 AC010486.2-201ENST00000505572 483 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF3O43395 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF3O43395 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PRPF3O43395 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF3O43395 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF3O43395 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF3O43395 AL161713.1-201ENST00000555538 145 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF3O43395 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF3O43395 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF3O43395 AL512347.1-201ENST00000566420 503 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF3O43395 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF3O43395 AC007566.2-201ENST00000603642 413 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF3O43395 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF3O43395 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PRPF3O43395 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.28□□□□□ -1.56
PRPF3O43395 MIR4496-201ENST00000635896 61 ntBASIC5.28□□□□□ -1.56
PRPF3O43395 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PRPF3O43395 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF3O43395 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PRPF3O43395 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF3O43395 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF3O43395 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF3O43395 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF3O43395 MAPK10-286ENST00000641208 8747 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF3O43395 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF3O43395 AC012618.3-205ENST00000637896 1496 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 RNA5SP151-201ENST00000365632 117 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF3O43395 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF3O43395 MIR659-201ENST00000384963 97 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 BTBD10P2-201ENST00000404779 676 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AC068533.2-201ENST00000411872 306 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 RPS15AP38-201ENST00000413110 372 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF3O43395 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.27□□□□□ -1.57
PRPF3O43395 MTND6P18-201ENST00000439477 513 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF3O43395 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF3O43395 ART2BP-201ENST00000453501 499 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 RPL18AP17-201ENST00000455326 198 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF3O43395 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF3O43395 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PRPF3O43395 HMGB1P19-201ENST00000517578 577 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF3O43395 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.27□□□□□ -1.57
PRPF3O43395 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF3O43395 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF3O43395 AP001781.1-201ENST00000530977 207 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF3O43395 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF3O43395 AC090502.2-201ENST00000549267 280 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AC008015.1-201ENST00000555505 465 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.27□□□□□ -1.57
PRPF3O43395 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF3O43395 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms