Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AL161729.3-201ENST00000603533 673 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 IGHV3-29-201ENST00000604817 344 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AL009028.1-201ENST00000604895 802 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AC090948.1-201ENST00000607464 549 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AL109659.3-201ENST00000624985 950 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC000367.1-201ENST00000452711 1766 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 SNORA51.2-201ENST00000364595 132 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 RPS16P5-201ENST00000406501 404 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 RNU6-272P-201ENST00000411028 104 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC127526.1-201ENST00000417526 366 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 MTND2P16-201ENST00000419987 799 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 YWHAZP8-201ENST00000436935 731 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 RPS29P31-201ENST00000446147 164 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 NANOGP10-201ENST00000453325 895 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 RNU6-488P-201ENST00000515918 99 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC026616.1-201ENST00000523157 525 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 ATP5F1P7-201ENST00000567330 760 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC069366.1-201ENST00000583159 838 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC008687.2-201ENST00000597865 520 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 SNRPGP15-201ENST00000600149 222 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC079880.2-201ENST00000603790 1213 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AL450270.1-201ENST00000606160 391 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC012467.1-201ENST00000607740 256 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC103710.3-201ENST00000608157 948 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC008121.2-201ENST00000614647 523 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 AL590396.2-201ENST00000636511 1041 ntBASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RCL1Q9Y2P8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 RNA5SP399-201ENST00000364003 117 ntBASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 MIR129-1-201ENST00000384972 72 ntBASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 AL391417.1-201ENST00000404100 426 ntBASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 AC073264.1-201ENST00000411508 416 ntBASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 AC119751.6-201ENST00000416712 186 ntBASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 OR5BE1P-201ENST00000425977 939 ntBASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RCL1Q9Y2P8 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms