Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MIR6862-1-201ENST00000613016 70 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 MIR6862-2-201ENST00000614755 70 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 uc_338.29-201ENST00000615099 168 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 OR52H1-202ENST00000641796 1061 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 MTND5P28-201ENST00000438005 1594 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC005332.9-201ENST00000620266 2921 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AL355377.1-201ENST00000621125 1653 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 API5P2-201ENST00000397055 1498 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 PPIAP24-201ENST00000328558 471 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 RPL32P3-201ENST00000359025 275 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 RN7SKP188-201ENST00000410789 317 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC078974.1-201ENST00000411597 223 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AL590609.2-201ENST00000421430 368 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AL731534.1-201ENST00000434711 269 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC006512.1-201ENST00000468816 291 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC034222.1-201ENST00000494052 532 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC106872.2-201ENST00000494303 480 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC097473.1-201ENST00000508142 408 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 RNU2-53P-201ENST00000516257 147 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC087854.1-201ENST00000519706 414 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 SUMO2P20-201ENST00000520803 283 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 MIR4790-201ENST00000577799 79 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC104695.2-201ENST00000605056 775 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AL683813.2-201ENST00000605245 502 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC018889.1-201ENST00000605372 397 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC015982.1-201ENST00000608113 465 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 PLCE1P1-201ENST00000622094 305 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 AC004972.1-201ENST00000623934 2209 ntBASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.37□□□□□ -1.39
CUEDC1Q9NWM3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC062029.1-202ENST00000606164 3651 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 PANDAR-201ENST00000629595 1506 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AP003486.1-201ENST00000525716 3994 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC079753.1-201ENST00000623243 3868 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-874P-201ENST00000362390 105 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 Y_RNA.212-201ENST00000364177 102 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 U3.52-201ENST00000384034 216 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms