Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SDCBPP3-201ENST00000419629 891 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 VN1R42P-201ENST00000424651 344 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC007742.1-201ENST00000425789 329 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RPL7P4-203ENST00000430239 730 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 PTP4A1P3-201ENST00000433661 420 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ELOCP26-201ENST00000436067 329 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 TRIM60P18-201ENST00000441518 828 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 MTCO1P53-201ENST00000441633 699 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 PRDX3P3-201ENST00000447765 522 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC007395.1-201ENST00000451333 677 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 Y_RNA.638-201ENST00000459374 113 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RPL31P60-201ENST00000478450 367 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 VN1R105P-201ENST00000486595 910 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC010374.1-201ENST00000503762 1237 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ATG10-AS1-201ENST00000504846 648 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ASNSP4-201ENST00000511103 447 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC111000.6-201ENST00000514471 709 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNU6-362P-201ENST00000516736 90 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 HMGB1P40-201ENST00000525121 540 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC130364.2-201ENST00000528639 604 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC011497.2-201ENST00000600255 639 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL591034.3-201ENST00000605511 685 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL021368.3-201ENST00000607119 578 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC008121.2-201ENST00000614647 523 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL035461.2-201ENST00000619201 524 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC004836.1-201ENST00000623032 634 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL157770.1-201ENST00000623049 439 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 PFKM-232ENST00000629846 381 ntTSL 4 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL512310.3-201ENST00000547023 1335 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC104964.2-201ENST00000562242 4641 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 Y_RNA.340-201ENST00000365330 92 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNU6-746P-201ENST00000384112 109 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNU6-83P-201ENST00000384568 112 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SNORA48.4-201ENST00000391089 134 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 GSTA9P-201ENST00000406231 611 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RPL5P18-201ENST00000406671 891 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AP000275.1-201ENST00000411943 390 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 NIFKP3-201ENST00000417799 865 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 MEMO1P3-201ENST00000459811 302 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNU6-1041P-201ENST00000516254 102 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 MORF4L1P3-201ENST00000525966 950 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 OR5M7P-201ENST00000526140 972 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC008088.1-201ENST00000580993 280 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 FAM60CP-201ENST00000591086 664 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL355974.3-201ENST00000617383 467 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC137590.2-201ENST00000619709 240 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL136221.1-201ENST00000621449 509 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SIK2-201ENST00000304987 9678 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMCN1Q96RW7 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms