Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 FTH1P24-201ENST00000503502 462 ntBASIC3.19□□□□□ -1.9
CDC42P60953 AC021146.5-201ENST00000503544 545 ntBASIC3.19□□□□□ -1.9
CDC42P60953 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.19□□□□□ -1.9
CDC42P60953 AC108064.1-201ENST00000513791 460 ntBASIC3.19□□□□□ -1.9
CDC42P60953 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.19□□□□□ -1.9
CDC42P60953 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42P60953 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42P60953 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42P60953 AGGF1P6-201ENST00000569213 976 ntBASIC3.19□□□□□ -1.9
CDC42P60953 AP000919.1-202ENST00000581139 1264 ntBASIC3.19□□□□□ -1.9
CDC42P60953 MIR5187-201ENST00000583479 76 ntBASIC3.19□□□□□ -1.9
CDC42P60953 AC011468.4-201ENST00000603942 409 ntBASIC3.19□□□□□ -1.9
CDC42P60953 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.19□□□□□ -1.9
CDC42P60953 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42P60953 AC123768.4-201ENST00000616244 701 ntBASIC3.19□□□□□ -1.9
CDC42P60953 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42P60953 AC069209.1-201ENST00000619282 651 ntBASIC3.19□□□□□ -1.9
CDC42P60953 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.19□□□□□ -1.9
CDC42P60953 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42P60953 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42P60953 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42P60953 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42P60953 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.19□□□□□ -1.9
CDC42P60953 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CDC42P60953 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.19□□□□□ -1.9
CDC42P60953 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.18□□□□□ -1.9
CDC42P60953 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 AC017071.1-201ENST00000564407 2204 ntBASIC3.18□□□□□ -1.9
CDC42P60953 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 AC068538.1-201ENST00000376856 336 ntBASIC3.18□□□□□ -1.9
CDC42P60953 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
CDC42P60953 AL034374.1-201ENST00000406329 351 ntBASIC3.18□□□□□ -1.9
CDC42P60953 RN7SKP53-201ENST00000411337 315 ntBASIC3.18□□□□□ -1.9
CDC42P60953 AL139247.1-201ENST00000422768 325 ntBASIC3.18□□□□□ -1.9
CDC42P60953 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.18□□□□□ -1.9
CDC42P60953 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 AL117339.2-201ENST00000430475 180 ntBASIC3.18□□□□□ -1.9
CDC42P60953 B3GNT2P1-201ENST00000434960 952 ntBASIC3.18□□□□□ -1.9
CDC42P60953 RPL23AP22-201ENST00000437556 453 ntBASIC3.18□□□□□ -1.9
CDC42P60953 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC42P60953 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC42P60953 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC42P60953 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.18□□□□□ -1.9
CDC42P60953 AP002884.2-201ENST00000471647 395 ntBASIC3.18□□□□□ -1.9
CDC42P60953 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
CDC42P60953 RN7SL132P-201ENST00000478131 296 ntBASIC3.18□□□□□ -1.9
CDC42P60953 AC023050.1-201ENST00000498198 304 ntBASIC3.18□□□□□ -1.9
CDC42P60953 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 AC010460.1-201ENST00000507087 466 ntBASIC3.18□□□□□ -1.9
CDC42P60953 RNU6-352P-201ENST00000516908 107 ntBASIC3.18□□□□□ -1.9
CDC42P60953 OR5D17P-201ENST00000531492 978 ntBASIC3.18□□□□□ -1.9
CDC42P60953 UBE2NP1-201ENST00000545592 458 ntBASIC3.18□□□□□ -1.9
CDC42P60953 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.18□□□□□ -1.9
CDC42P60953 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC42P60953 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC42P60953 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC42P60953 MIR378J-201ENST00000611988 109 ntBASIC3.18□□□□□ -1.9
CDC42P60953 AC083809.1-201ENST00000615051 472 ntBASIC3.18□□□□□ -1.9
CDC42P60953 AC018816.2-201ENST00000621460 353 ntBASIC3.18□□□□□ -1.9
CDC42P60953 PLCE1P1-201ENST00000622094 305 ntBASIC3.18□□□□□ -1.9
CDC42P60953 FP236240.3-201ENST00000623061 327 ntBASIC3.18□□□□□ -1.9
CDC42P60953 AC145207.9-201ENST00000623802 325 ntBASIC3.18□□□□□ -1.9
CDC42P60953 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.18□□□□□ -1.9
CDC42P60953 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.18□□□□□ -1.9
CDC42P60953 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.18□□□□□ -1.9
CDC42P60953 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.18□□□□□ -1.9
CDC42P60953 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CDC42P60953 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.18□□□□□ -1.9
CDC42P60953 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42P60953 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CDC42P60953 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CDC42P60953 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC42P60953 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC42P60953 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CDC42P60953 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.17□□□□□ -1.9
CDC42P60953 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.17□□□□□ -1.9
CDC42P60953 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC42P60953 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC42P60953 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.17□□□□□ -1.9
CDC42P60953 HMGB1P10-201ENST00000395823 563 ntBASIC3.17□□□□□ -1.9
CDC42P60953 PPIAP31-201ENST00000405422 495 ntBASIC3.17□□□□□ -1.9
CDC42P60953 RNU6-628P-201ENST00000410675 107 ntBASIC3.17□□□□□ -1.9
CDC42P60953 AC126124.2-201ENST00000413542 321 ntBASIC3.17□□□□□ -1.9
CDC42P60953 AL356968.1-201ENST00000416622 474 ntBASIC3.17□□□□□ -1.9
CDC42P60953 MTND2P15-201ENST00000418575 892 ntBASIC3.17□□□□□ -1.9
CDC42P60953 ISCA1P2-201ENST00000438679 421 ntBASIC3.17□□□□□ -1.9
CDC42P60953 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.17□□□□□ -1.9
CDC42P60953 AC008264.1-201ENST00000447612 367 ntBASIC3.17□□□□□ -1.9
CDC42P60953 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.17□□□□□ -1.9
CDC42P60953 AC097262.1-201ENST00000452559 548 ntBASIC3.17□□□□□ -1.9
CDC42P60953 AC007967.1-201ENST00000455422 1159 ntBASIC3.17□□□□□ -1.9
CDC42P60953 RN7SL385P-201ENST00000468873 276 ntBASIC3.17□□□□□ -1.9
CDC42P60953 RPL5P23-201ENST00000496040 868 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms