Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 AL031595.2-201ENST00000624215 19071 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC092376.2-201ENST00000622621 4116 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AL034370.1-201ENST00000397254 1590 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 RNU5F-7P-201ENST00000363696 115 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 MIR105-2-201ENST00000385083 81 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AL161909.1-201ENST00000397390 712 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 MTCYBP36-201ENST00000404146 440 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 MIR1284-201ENST00000408337 120 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 RN7SKP16-201ENST00000410180 299 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 RN7SKP213-201ENST00000410746 298 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 USP9YP13-201ENST00000417797 480 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 LINC00993-201ENST00000420453 540 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 GAPDHP49-201ENST00000421421 961 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 COX6CP13-201ENST00000428703 226 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC073464.1-201ENST00000429823 534 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 KCTD9P3-201ENST00000434597 1169 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 AL354714.3-201ENST00000447284 493 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC073850.1-201ENST00000449243 255 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 RN7SL515P-201ENST00000463999 297 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 HMGN2P25-201ENST00000486956 268 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AL049874.2-201ENST00000492636 288 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 OR5M14P-201ENST00000506803 618 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 AP001893.2-201ENST00000526949 202 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 HMGB1P33-201ENST00000563485 527 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 KPNA2P3-201ENST00000584190 848 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC022432.1-201ENST00000595739 310 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC105254.2-201ENST00000603636 436 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC013244.1-201ENST00000604279 193 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC018695.5-201ENST00000605872 315 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 AC010338.1-201ENST00000621823 717 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 MIR6863-201ENST00000636112 90 ntBASIC5.59□□□□□ -1.51
NCKAP1LP55160 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.59□□□□□ -1.51
NCKAP1LP55160 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NCKAP1LP55160 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NCKAP1LP55160 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.52
NCKAP1LP55160 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NCKAP1LP55160 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NCKAP1LP55160 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NCKAP1LP55160 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.58□□□□□ -1.52
NCKAP1LP55160 HSPA8P18-201ENST00000439846 1928 ntBASIC5.58□□□□□ -1.52
NCKAP1LP55160 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NCKAP1LP55160 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NCKAP1LP55160 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.58□□□□□ -1.52
NCKAP1LP55160 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NCKAP1LP55160 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NCKAP1LP55160 RNA5SP305-201ENST00000362665 119 ntBASIC5.58□□□□□ -1.52
NCKAP1LP55160 Y_RNA.89-201ENST00000363031 102 ntBASIC5.58□□□□□ -1.52
NCKAP1LP55160 RNU5E-5P-201ENST00000365379 116 ntBASIC5.58□□□□□ -1.52
NCKAP1LP55160 RNU6-452P-201ENST00000384406 107 ntBASIC5.58□□□□□ -1.52
NCKAP1LP55160 MT-TP-201ENST00000387461 68 ntBASIC5.58□□□□□ -1.52
NCKAP1LP55160 SNORA77-201ENST00000408716 125 ntBASIC5.58□□□□□ -1.52
NCKAP1LP55160 AC069157.1-201ENST00000421749 137 ntBASIC5.58□□□□□ -1.52
NCKAP1LP55160 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NCKAP1LP55160 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.58□□□□□ -1.52
NCKAP1LP55160 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.58□□□□□ -1.52
NCKAP1LP55160 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.58□□□□□ -1.52
NCKAP1LP55160 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.58□□□□□ -1.52
NCKAP1LP55160 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.58□□□□□ -1.52
NCKAP1LP55160 AC007677.1-201ENST00000445757 515 ntBASIC5.58□□□□□ -1.52
NCKAP1LP55160 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.58□□□□□ -1.52
NCKAP1LP55160 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms