Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.48□□□□□ -1.21
NUBP1P53384 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.48□□□□□ -1.21
NUBP1P53384 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.48□□□□□ -1.21
NUBP1P53384 AC000068.3-201ENST00000607934 427 ntBASIC7.48□□□□□ -1.21
NUBP1P53384 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NUBP1P53384 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.48□□□□□ -1.21
NUBP1P53384 AL136140.2-201ENST00000624717 1705 ntBASIC7.48□□□□□ -1.21
NUBP1P53384 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
NUBP1P53384 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.48□□□□□ -1.21
NUBP1P53384 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC7.48□□□□□ -1.21
NUBP1P53384 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
NUBP1P53384 OR4G2P-202ENST00000641004 1759 ntBASIC7.48□□□□□ -1.21
NUBP1P53384 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
NUBP1P53384 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NUBP1P53384 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NUBP1P53384 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NUBP1P53384 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
NUBP1P53384 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
NUBP1P53384 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.47□□□□□ -1.21
NUBP1P53384 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 SAMMSON-203ENST00000641005 2168 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 AL606537.1-201ENST00000607258 2011 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 NAT10-210ENST00000615292 3329 ntTSL 5 BASIC7.47□□□□□ -1.21
NUBP1P53384 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC7.47□□□□□ -1.21
NUBP1P53384 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC7.47□□□□□ -1.21
NUBP1P53384 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
NUBP1P53384 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
NUBP1P53384 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
NUBP1P53384 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC7.47□□□□□ -1.21
NUBP1P53384 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
NUBP1P53384 PRO1804-201ENST00000623780 2050 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
NUBP1P53384 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
NUBP1P53384 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.47□□□□□ -1.21
NUBP1P53384 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
NUBP1P53384 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.47□□□□□ -1.21
NUBP1P53384 RNU5B-2P-201ENST00000363036 113 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC7.47□□□□□ -1.21
NUBP1P53384 SPATA20P1-201ENST00000423089 438 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 CR769767.1-201ENST00000436337 346 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.47□□□□□ -1.21
NUBP1P53384 AC009518.3-201ENST00000438972 253 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 FPGT-203ENST00000467578 601 ntTSL 2 BASIC7.47□□□□□ -1.21
NUBP1P53384 NDUFS5P2-201ENST00000484004 306 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 AL160314.1-201ENST00000490836 438 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 RN7SL775P-201ENST00000498361 336 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.47□□□□□ -1.21
NUBP1P53384 RNU4ATAC15P-201ENST00000516415 126 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 RNU6-143P-201ENST00000516942 93 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 AK6P2-201ENST00000549020 471 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 AC233702.2-202ENST00000562547 291 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 MIR3154-201ENST00000577829 84 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.47□□□□□ -1.21
NUBP1P53384 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.47□□□□□ -1.21
NUBP1P53384 RPS4XP21-201ENST00000603814 750 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.47□□□□□ -1.21
NUBP1P53384 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.47□□□□□ -1.21
NUBP1P53384 MIR6823-201ENST00000622118 61 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 Z99571.1-201ENST00000636677 394 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
NUBP1P53384 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
NUBP1P53384 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
NUBP1P53384 AC018880.1-201ENST00000418898 1319 ntBASIC7.47□□□□□ -1.21
NUBP1P53384 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC7.47□□□□□ -1.21
NUBP1P53384 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
NUBP1P53384 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUBP1P53384 MBP-206ENST00000397863 4800 ntTSL 3 BASIC7.47□□□□□ -1.21
NUBP1P53384 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.46□□□□□ -1.21
NUBP1P53384 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
NUBP1P53384 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
NUBP1P53384 AL359263.1-201ENST00000441188 2796 ntBASIC7.46□□□□□ -1.21
NUBP1P53384 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.46□□□□□ -1.21
NUBP1P53384 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.46□□□□□ -1.22
NUBP1P53384 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NUBP1P53384 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
NUBP1P53384 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NUBP1P53384 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
NUBP1P53384 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms