Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.5■□□□□ 0.55
AP4B1Q9Y6B7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 BX276092.2-201ENST00000417668 665 ntBASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 PGM5P4-201ENST00000421970 445 ntBASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 CYP21A1P-202ENST00000354927 1481 ntBASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.49■□□□□ 0.55
AP4B1Q9Y6B7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 AC073210.2-201ENST00000430369 194 ntBASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 AC092118.2-201ENST00000613495 667 ntBASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 AC133041.1-202ENST00000642053 222 ntBASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 NOC2LP2-201ENST00000407594 1944 ntBASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4B1Q9Y6B7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms