Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 AC084018.2-201ENST00000613093 2607 ntBASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 RARRES2P6-201ENST00000567333 442 ntBASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.32■□□□□ 0.52
LRCH1Q9Y2L9 AL512353.2-201ENST00000448759 1962 ntBASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 AC141586.3-201ENST00000562166 1838 ntBASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LRCH1Q9Y2L9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH1Q9Y2L9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms