Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 KRT18P56-201ENST00000507275 550 ntBASIC25.24■■□□□ 1.63
SPG7Q9UQ90 NT5C-210ENST00000582160 860 ntTSL 2 BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SPG7Q9UQ90 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 BET1L-202ENST00000332865 533 ntTSL 5 BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 DAP-202ENST00000432074 1048 ntTSL 2 BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 NEK4P2-201ENST00000580004 1012 ntBASIC25.23■■□□□ 1.63
SPG7Q9UQ90 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC25.23■■□□□ 1.63
SPG7Q9UQ90 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 AC005332.1-201ENST00000577698 1310 ntBASIC25.22■■□□□ 1.63
SPG7Q9UQ90 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 SNX5-210ENST00000481323 562 ntTSL 3 BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
SPG7Q9UQ90 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 AC116407.4-201ENST00000623319 1061 ntBASIC25.21■■□□□ 1.63
SPG7Q9UQ90 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC25.21■■□□□ 1.63
SPG7Q9UQ90 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SPG7Q9UQ90 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SPG7Q9UQ90 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC25.2■■□□□ 1.62
SPG7Q9UQ90 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SPG7Q9UQ90 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC25.2■■□□□ 1.62
SPG7Q9UQ90 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC25.2■■□□□ 1.62
SPG7Q9UQ90 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC25.2■■□□□ 1.62
SPG7Q9UQ90 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC25.2■■□□□ 1.62
SPG7Q9UQ90 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SPG7Q9UQ90 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SPG7Q9UQ90 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC25.2■■□□□ 1.62
SPG7Q9UQ90 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SPG7Q9UQ90 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms