Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 AC112482.1-201ENST00000492080 688 ntBASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 IGHV3-22-201ENST00000520721 359 ntBASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RIMBP3Q9UFD9 Z83836.1-201ENST00000624605 1642 ntBASIC30.82■■■□□ 2.52
RIMBP3Q9UFD9 PHGDH-210ENST00000641115 1638 ntBASIC30.82■■■□□ 2.52
RIMBP3Q9UFD9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RIMBP3Q9UFD9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RIMBP3Q9UFD9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC30.82■■■□□ 2.52
RIMBP3Q9UFD9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
RIMBP3Q9UFD9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RIMBP3Q9UFD9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC30.82■■■□□ 2.52
RIMBP3Q9UFD9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RIMBP3Q9UFD9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC30.82■■■□□ 2.52
RIMBP3Q9UFD9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
RIMBP3Q9UFD9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
RIMBP3Q9UFD9 LINC01465-201ENST00000408887 1940 ntBASIC30.81■■■□□ 2.52
RIMBP3Q9UFD9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC30.81■■■□□ 2.52
RIMBP3Q9UFD9 AC090616.6-201ENST00000582640 721 ntBASIC30.81■■■□□ 2.52
RIMBP3Q9UFD9 AC027601.4-201ENST00000611259 610 ntBASIC30.81■■■□□ 2.52
RIMBP3Q9UFD9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RIMBP3Q9UFD9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
RIMBP3Q9UFD9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC30.81■■■□□ 2.52
RIMBP3Q9UFD9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 AP005901.3-202ENST00000581653 237 ntBASIC30.8■■■□□ 2.52
RIMBP3Q9UFD9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 AC036111.1-201ENST00000533973 1582 ntBASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 AC092364.2-202ENST00000597012 1073 ntBASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 AC008608.2-201ENST00000606089 416 ntBASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC30.79■■■□□ 2.52
RIMBP3Q9UFD9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC30.78■■■□□ 2.52
RIMBP3Q9UFD9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RIMBP3Q9UFD9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC30.78■■■□□ 2.52
RIMBP3Q9UFD9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
RIMBP3Q9UFD9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC30.78■■■□□ 2.52
RIMBP3Q9UFD9 DNAJB3-201ENST00000446806 729 ntBASIC30.78■■■□□ 2.52
RIMBP3Q9UFD9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC30.78■■■□□ 2.52
RIMBP3Q9UFD9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
RIMBP3Q9UFD9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
RIMBP3Q9UFD9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RIMBP3Q9UFD9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC30.77■■■□□ 2.52
RIMBP3Q9UFD9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.77■■■□□ 2.52
RIMBP3Q9UFD9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RIMBP3Q9UFD9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RIMBP3Q9UFD9 AP006288.1-201ENST00000446065 395 ntBASIC30.77■■■□□ 2.52
RIMBP3Q9UFD9 AC034105.1-201ENST00000563488 319 ntBASIC30.77■■■□□ 2.52
RIMBP3Q9UFD9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC30.77■■■□□ 2.52
RIMBP3Q9UFD9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RIMBP3Q9UFD9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC30.77■■■□□ 2.52
RIMBP3Q9UFD9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC30.76■■■□□ 2.52
RIMBP3Q9UFD9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC30.76■■■□□ 2.52
RIMBP3Q9UFD9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RIMBP3Q9UFD9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RIMBP3Q9UFD9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms