Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 OR6D1P-202ENST00000641007 5290 ntBASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 AL691432.2-201ENST00000607222 2038 ntBASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 AC239809.2-201ENST00000415381 517 ntBASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00474Q9P2X8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 AC008403.3-201ENST00000598924 454 ntBASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00474Q9P2X8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms