Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 TPSP2-201ENST00000561760 610 ntBASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 TSSC2-201ENST00000450217 709 ntBASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRP1BQ9NZR2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRP1BQ9NZR2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 AL160237.2-201ENST00000556165 472 ntBASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 AKR1C7P-201ENST00000305623 895 ntBASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.27□□□□□ -0.45
LRP1BQ9NZR2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 SLC25A1P1-201ENST00000528351 927 ntBASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 HLA-F-220ENST00000434407 884 ntBASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRP1BQ9NZR2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LRP1BQ9NZR2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LRP1BQ9NZR2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
LRP1BQ9NZR2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.25□□□□□ -0.45
LRP1BQ9NZR2 NUS1P1-201ENST00000446295 882 ntBASIC12.25□□□□□ -0.45
LRP1BQ9NZR2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.25□□□□□ -0.45
LRP1BQ9NZR2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.25□□□□□ -0.45
LRP1BQ9NZR2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LRP1BQ9NZR2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms