Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PARPBPQ9NWS1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.27■□□□□ 0.36
PARPBPQ9NWS1 AC012618.2-201ENST00000428058 849 ntBASIC17.27■□□□□ 0.36
PARPBPQ9NWS1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PARPBPQ9NWS1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PARPBPQ9NWS1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.27■□□□□ 0.36
PARPBPQ9NWS1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PARPBPQ9NWS1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PARPBPQ9NWS1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PARPBPQ9NWS1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.27■□□□□ 0.35
PARPBPQ9NWS1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.27■□□□□ 0.35
PARPBPQ9NWS1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
PARPBPQ9NWS1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PARPBPQ9NWS1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.27■□□□□ 0.35
PARPBPQ9NWS1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.27■□□□□ 0.35
PARPBPQ9NWS1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PARPBPQ9NWS1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PARPBPQ9NWS1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PARPBPQ9NWS1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PARPBPQ9NWS1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 KSR1P1-201ENST00000446298 240 ntBASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 AC008550.1-201ENST00000511500 884 ntBASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 AF186192.3-201ENST00000583427 947 ntBASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 AC073195.1-201ENST00000607241 877 ntBASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PARPBPQ9NWS1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 RPS2P55-201ENST00000397318 883 ntBASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 AC107956.1-201ENST00000494359 873 ntBASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.25■□□□□ 0.35
PARPBPQ9NWS1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.24■□□□□ 0.35
PARPBPQ9NWS1 NIFKP9-201ENST00000419265 221 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms