Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 AL133373.2-201ENST00000623187 2828 ntBASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 PHGDH-210ENST00000641115 1638 ntBASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 AC093525.10-201ENST00000625130 1569 ntBASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CCM2LQ9NUG4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCM2LQ9NUG4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.33■□□□□ 0.53
CCM2LQ9NUG4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCM2LQ9NUG4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCM2LQ9NUG4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCM2LQ9NUG4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCM2LQ9NUG4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.33■□□□□ 0.53
CCM2LQ9NUG4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.33■□□□□ 0.53
CCM2LQ9NUG4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 AC098590.1-201ENST00000468126 897 ntBASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 TEX21P-204ENST00000641479 1693 ntBASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 PCDHB18P-201ENST00000524813 2368 ntBASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2LQ9NUG4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 Z98044.1-201ENST00000632503 1764 ntBASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 MKRN4P-201ENST00000444706 1521 ntBASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2LQ9NUG4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 AL354751.1-201ENST00000412768 1863 ntBASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms