Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 KRT18P6-201ENST00000555540 1265 ntBASIC17.91■□□□□ 0.46
POLE3Q9NRF9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 AC104417.2-201ENST00000562989 1793 ntBASIC17.91■□□□□ 0.46
POLE3Q9NRF9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLE3Q9NRF9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 NBPF21P-201ENST00000425093 1451 ntBASIC17.9■□□□□ 0.46
POLE3Q9NRF9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 AC069544.1-201ENST00000609399 999 ntBASIC17.9■□□□□ 0.46
POLE3Q9NRF9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLE3Q9NRF9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
POLE3Q9NRF9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 AC004264.1-201ENST00000608354 794 ntBASIC17.89■□□□□ 0.45
POLE3Q9NRF9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLE3Q9NRF9 AC141586.3-201ENST00000562166 1838 ntBASIC17.88■□□□□ 0.45
POLE3Q9NRF9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
POLE3Q9NRF9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLE3Q9NRF9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLE3Q9NRF9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLE3Q9NRF9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLE3Q9NRF9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
POLE3Q9NRF9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.88■□□□□ 0.45
POLE3Q9NRF9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms