Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 ZNF815P-204ENST00000434898 1737 ntBASIC22.82■■□□□ 1.24
DDX4Q9NQI0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.82■■□□□ 1.24
DDX4Q9NQI0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX4Q9NQI0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 SDHAP1-207ENST00000440850 2000 ntBASIC22.81■■□□□ 1.24
DDX4Q9NQI0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 MIR4674-201ENST00000582457 87 ntBASIC22.81■■□□□ 1.24
DDX4Q9NQI0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX4Q9NQI0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.8■■□□□ 1.24
DDX4Q9NQI0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 LINC01238-205ENST00000567549 1107 ntBASIC22.8■■□□□ 1.24
DDX4Q9NQI0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX4Q9NQI0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.79■■□□□ 1.24
DDX4Q9NQI0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 KRT18P38-201ENST00000449496 1282 ntBASIC22.78■■□□□ 1.24
DDX4Q9NQI0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
DDX4Q9NQI0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms